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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57647.1
DDBJ      :             putative transcriptional regulator
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  5/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.121.1a.4.1
:195 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   23->179 2fq4A PDBj 7e-06 24.0 %
:RPS:PDB   6->189 3e7qA PDBj 9e-06 12.5 %
:HMM:SCOP  13->77 2id3A1 a.4.1.9 * 2.7e-11 32.3 %
:HMM:SCOP  82->189 2fq4A2 a.121.1.1 * 3.5e-05 25.2 %
:HMM:PFM   25->67 PF00440 * TetR_N 8.9e-15 46.5 43/47  
:BLT:SWISS 13->179 YDES_BACSU 6e-09 26.7 %
:PROS 35->66|PS01081|HTH_TETR_1
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57647.1 GT:GENE BAD57647.1 GT:PRODUCT putative transcriptional regulator GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(2988567..2989154) GB:FROM 2988567 GB:TO 2989154 GB:DIRECTION - GB:PRODUCT putative transcriptional regulator GB:PROTEIN_ID BAD57647.1 LENGTH 195 SQ:AASEQ MTRVSSESARPPGRPRSGLHAVVFAATLQTVHELGYARATVERIAAAAGVAKTTVYRRWPSKGALIIDCLLDAFGPVPLEGADRAEIMTGAIRWIAGKIAEPGVGDAFAGVFSDAVSDPELRTLLSTRFQDPYRIAVQDALGESEQRVLFYIDVVVGTLLHRMGMTGAPMVESDVEALIEMTLRYFGTGDEGNGR GT:EXON 1|1-195:0| BL:SWS:NREP 1 BL:SWS:REP 13->179|YDES_BACSU|6e-09|26.7|165/198| PROS 35->66|PS01081|HTH_TETR_1|PDOC00830| SEG 37->51|aratveriaaaagva| BL:PDB:NREP 1 BL:PDB:REP 23->179|2fq4A|7e-06|24.0|154/183| RP:PDB:NREP 1 RP:PDB:REP 6->189|3e7qA|9e-06|12.5|184/208| HM:PFM:NREP 1 HM:PFM:REP 25->67|PF00440|8.9e-15|46.5|43/47|TetR_N| HM:SCP:REP 13->77|2id3A1|2.7e-11|32.3|65/0|a.4.1.9|1/1|Homeodomain-like| HM:SCP:REP 82->189|2fq4A2|3.5e-05|25.2|107/0|a.121.1.1|1/1|Tetracyclin repressor-like, C-terminal domain| OP:NHOMO 5 OP:NHOMOORG 5 OP:PATTERN -------------------------------------------------------------------- ----1-------------------------------1----1-1-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 190 STR:RPRED 97.4 SQ:SECSTR #####cHHHHHHTccHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHTccHHHHHHHcccHHHHHHHHHHHHHHHHHTccccHHHHHHHHHHHHTcHHHHcGGGHHHHHHHHHHTTTcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTcHHHHHHHHHHHHHHHcTTcccHHHHHHHHHHHHHHHHTTccccHH DISOP:02AL 1-22, 190-195| PSIPRED cccccccccccccccHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHcccHHHHHHHcccHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHcccccccccc //