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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57649.1
DDBJ      :             putative ABC transporter
Swiss-Prot:             

Homologs  Archaea  68/68 : Bacteria  908/915 : Eukaryota  197/199 : Viruses  1/175   --->[See Alignment]
c.37.1f.37.1
:570 amino acids
:PSIPRED
:DISOPRED
:BLT:PDB   320->557 2hydA PDBj 2e-49 41.2 %
:RPS:PDB   335->552 3b5jA PDBj 3e-52 38.1 %
:RPS:SCOP  1->315 2hydA2  f.37.1.1 * 2e-13 12.7 %
:RPS:SCOP  310->564 1q3hA  c.37.1.12 * 4e-44 22.5 %
:HMM:SCOP  5->315 1pf4A2 f.37.1.1 * 3.7e-43 25.0 %
:HMM:SCOP  309->549 1pf4A1 c.37.1.12 * 3.8e-71 39.4 %
:RPS:PFM   369->494 PF00005 * ABC_tran 9e-11 38.0 %
:HMM:PFM   369->493 PF00005 * ABC_tran 1.5e-22 34.5 113/118  
:HMM:PFM   27->280 PF00664 * ABC_membrane 6.6e-16 18.7 252/275  
:HMM:PFM   357->378 PF03205 * MobB 0.00037 40.9 22/137  
:BLT:SWISS 1->106,282->562 Y1384_MYCBO 3e-57 45.2 %
:PROS 466->480|PS00211|ABC_TRANSPORTER_1
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57649.1 GT:GENE BAD57649.1 GT:PRODUCT putative ABC transporter GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 2991140..2992852 GB:FROM 2991140 GB:TO 2992852 GB:DIRECTION + GB:PRODUCT putative ABC transporter GB:PROTEIN_ID BAD57649.1 LENGTH 570 SQ:AASEQ MIRTLLRVLGPDYAPPVRRTIALMTLTAVAEGLSYALVVPVLRALLGDNPAEAEPWLIAFGAAVAGYALLRYRSDLSGFTVGTTLLRGVYHRLGDHLARLPVGWYTPGRVGEVSVLAGRGVLAALSVLAHLLAPLVSATVTPLTILAVMLAYEWRLGLAALVAVPIVAATQAVTARAATAGDAERHERDTEAANRVVEYLQAQPVLRAGGRTAERFALLDDALRAVERTSRKQIATALTGAVGATLTVQAMFTALLALAAYLALGGTVDVAEVLAILVLAARCADPLLALADIGSQVRGARAELRRLDAVLRTEPLPEPAEPIRPQRHDLAFDAVTFAHGDRPVLDGVTLTVPEGQRLAVVGPSGAGKSTLLHLLARFSDVDAGAVRIGGVDVRAIDTDTLMSRIAVVFQDVHLFDGTIEDNVRLGRPDATDAAVRAAAAAARLDEVIERLPDGWASHVGEGGALLSGGERQRVSIARALLKDAPIVLLDEVTSALDPVNEAAVHAGITRLMAGRTVVMVAHRLRTVRTADRIVFLDGGHVVEAGTHDELLARGGRYADFWRAAAGPAHT GT:EXON 1|1-570:0| BL:SWS:NREP 1 BL:SWS:REP 1->106,282->562|Y1384_MYCBO|3e-57|45.2|386/579| PROS 466->480|PS00211|ABC_TRANSPORTER_1|PDOC00185| TM:NTM 6 TM:REGION 21->43| TM:REGION 50->71| TM:REGION 120->142| TM:REGION 157->179| TM:REGION 239->261| TM:REGION 273->295| SEG 121->138|vlaalsvlahllaplvsa| SEG 156->183|lglaalvavpivaatqavtaraatagda| SEG 235->248|ataltgavgatltv| SEG 254->264|allalaaylal| SEG 268->281|vdvaevlailvlaa| SEG 429->443|datdaavraaaaaar| BL:PDB:NREP 1 BL:PDB:REP 320->557|2hydA|2e-49|41.2|238/578| RP:PDB:NREP 1 RP:PDB:REP 335->552|3b5jA|3e-52|38.1|218/243| RP:PFM:NREP 1 RP:PFM:REP 369->494|PF00005|9e-11|38.0|121/123|ABC_tran| HM:PFM:NREP 3 HM:PFM:REP 369->493|PF00005|1.5e-22|34.5|113/118|ABC_tran| HM:PFM:REP 27->280|PF00664|6.6e-16|18.7|252/275|ABC_membrane| HM:PFM:REP 357->378|PF03205|0.00037|40.9|22/137|MobB| GO:PFM:NREP 2 GO:PFM GO:0005524|"GO:ATP binding"|PF00005|IPR003439| GO:PFM GO:0016887|"GO:ATPase activity"|PF00005|IPR003439| RP:SCP:NREP 2 RP:SCP:REP 1->315|2hydA2|2e-13|12.7|314/323|f.37.1.1| RP:SCP:REP 310->564|1q3hA|4e-44|22.5|240/265|c.37.1.12| HM:SCP:REP 5->315|1pf4A2|3.7e-43|25.0|304/311|f.37.1.1|1/1|ABC transporter transmembrane region| HM:SCP:REP 309->549|1pf4A1|3.8e-71|39.4|241/244|c.37.1.12|1/1|P-loop containing nucleoside triphosphate hydrolases| OP:NHOMO 34925 OP:NHOMOORG 1174 OP:PATTERN CB639988BABAA8C7N3CCA9DDdGKOUIVGA59883A9A85DJJJPCCjWP6BHCBD89674F134 IIQC*QNVccbOQPTNPKK-KV77V*KKKKKNceefm***JxN*ermWiRRJghpKNZ88hlqc*Zo***bSQOOcQQUKwbS62855MLGF3F9CF--A7KBBBK8RJI111111133444449KIDKSGFNJNHRWXdf98DkDePWaMMNQUJKMCGEMEPROZrqyJCKCBCCCIBDB9TRTHGRL5QKaoosmsny*bv*urq*pmccjh*w*OUbkgYWaZZZaZ**LLLLLLNIMNLLLNLOMKIOofPYklXMbPjdbKLpsUPLNVZRSUacemdaehkjcfdabYbhYeaQTRQQRSSVSSQRfcdZYWcbdaVmhuokmkmtmjQsWbdbbIUTQ*SXadrYXIF**WRNNLLENRPUSFHOSEJOIIIHHDDFSL***SMYrsp*hrssvtpxqos*-dd*bW*fz**JA**************ACHqx**z***ovOOOOOOOOkPVJPbLr445453335557567867776866763859ACHADd**ltz*****lhijdrr**topoWs*z*yq*l7DijcqTcYbtYyu**MWVCKCHYKCEEEGCFLJHSVQKY*JWNbRKTdQOVBQQPMPPULQNJNMfhJlE89GC989A99556666766BCA7BFEcagFWDODIBaGJOOJGKTHHHMMPQTOON4-D9MHF222222rg*uKthchhjdigjbc-gdccfbfcefhlhabbaad***z*ghRecYbbdddddccdcbcyXVXZaXZN4oprpqspnpqsq23B867555EHHFK6oYvKKJPNJEIJGHJBDQHJLLJBJCFLbPmolok*s*kloghVyz*899799989BTVSoWYWWXgbcfhLKHEHFEGFHAAAA62FLDD766644354455*4P75649-567497566566B726445FQQIBMWNQK6JF 6755UTM-aF87TYWHLPJMRTTeVfPJJDFEFQUOFMMKMIIDDDTORcZXhcNKTKNIIJIFB8A92EA6EBICC2CE8CBAHH69-YgFLNROFFGLEBHTMH6M*l*YjWserNJLLMWKhoN*I**j2qVxNMLHcKQ*fHLLLDXIE*NWUTjNj*KoTSRwTY*oi*aGFJF*CB8IJmml*Iu*LL*q**c ------------------------------------------------------------------------------------------------------------------------------1------------------------------------------------ DISOP:02AL 314-326, 566-570| PSIPRED cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccEEEEEEEEEEccccHHHccccEEEccccEEEEEccccccHHHHHHHHHHcccccccEEEEccEEcccccHHHHHHHccccccccEEccccHHHHHHHccccccHHHHHHHHHHHcHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHcccEEEEEccHHHccHHHHHHHHHHHHHHHHcccEEEEEcHHHHHHHccEEEEEEccEEEEEccHHHHHHcccHHHHHHHHHHccccc //