[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57661.1
DDBJ      :             putative two-component system sensor kinase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  42/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.30.2d.122.1
:474 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   360->425 3dgeA PDBj 3e-04 34.8 %
:RPS:PDB   361->425 3cwvA PDBj 2e-08 20.3 %
:RPS:SCOP  235->297 2c2aA1  a.30.2.1 * 6e-04 12.7 %
:RPS:SCOP  366->419 1pvgA2  d.122.1.2 * 5e-09 25.9 %
:HMM:SCOP  232->316 2c2aA1 a.30.2.1 * 6.8e-09 22.4 %
:HMM:SCOP  320->473 2c2aA2 d.122.1.3 * 1.1e-28 27.3 %
:RPS:PFM   368->425 PF02518 * HATPase_c 9e-06 34.5 %
:HMM:PFM   366->470 PF02518 * HATPase_c 3.9e-20 30.5 105/111  
:HMM:PFM   165->243 PF00672 * HAMP 1.1e-11 30.8 65/70  
:HMM:PFM   251->312 PF00512 * HisKA 1.3e-09 29.0 62/68  
:BLT:SWISS 224->425 BASS_SALTY 5e-11 21.5 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57661.1 GT:GENE BAD57661.1 GT:PRODUCT putative two-component system sensor kinase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(3003827..3005251) GB:FROM 3003827 GB:TO 3005251 GB:DIRECTION - GB:PRODUCT putative two-component system sensor kinase GB:PROTEIN_ID BAD57661.1 LENGTH 474 SQ:AASEQ MRRRLLVALTVFAAIAVLAFAVPLSLTYATSRTQQLVLGRSGDADRFASLADAVATAEGDTAALVEEVTGYHALYGENVLVVDARGATTVNAGIDTADPDVAAAVAAARRNQQPQPAVRLLPWSAATMLIARPVGTGVQVNGAVVIQASTTAARADITRAWTVIVLGAVLAMLVFMLLAVTLSRWVLRPLAALSDAVAELTATLPTPPPGTPDPAAPTSLTRRHGGPPEMRAVAQSFDAMARAVADSAHAQRQLVADTAHAMRNPLAALTIRLDSLEPAVPESAAPTFRKASAEVERLTTLLDGLLTLAVAETPAAFPAEADRDRCDAVQVVADRVDAWHSAFHAAEQTLVAADAMGSTEVAVPADTLAQILDVLLSNANRYAGAGTRTVIAVTAEPDGVTVTVRDDGAGVPAPELDRLTTRFYRGSTAPAGGSGLGLPIAAALAQARGGRLTVAAADPHGLAVSVHLPAAVPA GT:EXON 1|1-474:0| BL:SWS:NREP 1 BL:SWS:REP 224->425|BASS_SALTY|5e-11|21.5|195/356| TM:NTM 3 TM:REGION 6->27| TM:REGION 132->153| TM:REGION 157->179| SEG 5->22|llvaltvfaaiavlafav| SEG 95->119|dtadpdvaaavaaarrnqqpqpavr| SEG 165->182|vlgavlamlvfmllavtl| SEG 196->218|avaeltatlptpppgtpdpaapt| SEG 298->308|lttlldglltl| SEG 321->338|adrdrcdavqvvadrvda| SEG 426->453|gstapaggsglglpiaaalaqarggrlt| BL:PDB:NREP 1 BL:PDB:REP 360->425|3dgeA|3e-04|34.8|66/237| RP:PDB:NREP 1 RP:PDB:REP 361->425|3cwvA|2e-08|20.3|64/349| RP:PFM:NREP 1 RP:PFM:REP 368->425|PF02518|9e-06|34.5|58/112|HATPase_c| HM:PFM:NREP 3 HM:PFM:REP 366->470|PF02518|3.9e-20|30.5|105/111|HATPase_c| HM:PFM:REP 165->243|PF00672|1.1e-11|30.8|65/70|HAMP| HM:PFM:REP 251->312|PF00512|1.3e-09|29.0|62/68|HisKA| GO:PFM:NREP 1 GO:PFM GO:0005524|"GO:ATP binding"|PF02518|IPR003594| RP:SCP:NREP 2 RP:SCP:REP 235->297|2c2aA1|6e-04|12.7|63/89|a.30.2.1| RP:SCP:REP 366->419|1pvgA2|5e-09|25.9|54/239|d.122.1.2| HM:SCP:REP 232->316|2c2aA1|6.8e-09|22.4|85/0|a.30.2.1|1/1|Homodimeric domain of signal transducing histidine kinase| HM:SCP:REP 320->473|2c2aA2|1.1e-28|27.3|154/0|d.122.1.3|1/1|ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase| OP:NHOMO 49 OP:NHOMOORG 42 OP:PATTERN -------------------------------------------------------------------- ------------------------------------1-22-11---------111-----11--1-233-------------------------------------------------------------------------------------------------------------------1----------------------------------11----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-1-------11--------------1------------------1-------------------1-------------------------------------------------------------------------------------------------------------------------------1-111-1111111111-------------------------------------1------------------------------------------1---------------------------11----------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 250 STR:RPRED 52.7 SQ:SECSTR ##########################################################################################################################################################################################################################HHHHHTTTHHcHTTcccHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTGGGccTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTccccccEEEEHHHHHHHHHHHHHHHHccccccccccHHHHHHccccHHHHHHHHHHHHHHHHHHHHTTcccEEEEEEcTTGccEEEEEEEccccHHHHHHHHTTTTG######cccccHHHHHHHHHHHTTcEEEEEEETTTEEEEEEEEEccTTT DISOP:02AL 429-431| PSIPRED ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHccHHHHHccccccccEEEEEEccccEEEEcccccccccHHHHccccccccccccccccccccccEEEEEEEccccccccEEEEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHcccHHHHHHHHHHHHHHHHHHHHHcccEEEEEEcccccEEEEcHHHHHHHHHHHHHHHHHccccccEEEEEEEEEccEEEEEEEEccccccHHHHHHHccccEEccccccccccHHHHHHHHHHHHcccEEEEEEcccccEEEEEEEcccccc //