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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57662.1
DDBJ      :             putative two-component system response regulator
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  581/915 : Eukaryota  3/199 : Viruses  0/175   --->[See Alignment]
a.4.6c.23.1
:219 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   20->216 2oqrA PDBj 5e-22 33.5 %
:RPS:PDB   23->105 3cwoX PDBj 3e-10 14.5 %
:RPS:PDB   145->217 2d1vA PDBj 6e-14 34.2 %
:RPS:SCOP  19->106 1a0oA  c.23.1.1 * 5e-10 29.5 %
:RPS:SCOP  145->217 1gxpA  a.4.6.1 * 1e-16 32.9 %
:HMM:SCOP  1->187 1s8nA_ c.23.1.1 * 5.9e-29 30.6 %
:RPS:PFM   35->106 PF00072 * Response_reg 6e-10 42.3 %
:RPS:PFM   145->216 PF00486 * Trans_reg_C 4e-12 48.6 %
:HMM:PFM   145->217 PF00486 * Trans_reg_C 2.6e-25 47.9 73/77  
:HMM:PFM   4->109 PF00072 * Response_reg 6.8e-22 33.3 105/112  
:HMM:PFM   101->160 PF04949 * DUF662 0.00039 30.0 60/160  
:BLT:SWISS 20->216 REGX3_MYCS2 9e-22 39.6 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57662.1 GT:GENE BAD57662.1 GT:PRODUCT putative two-component system response regulator GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(3005256..3005915) GB:FROM 3005256 GB:TO 3005915 GB:DIRECTION - GB:PRODUCT putative two-component system response regulator GB:PROTEIN_ID BAD57662.1 LENGTH 219 SQ:AASEQ MRLAVVEDDDGVGDALVEALTARGFRADRKRRGAELLLDHRGYDAVILDLGLPDGDGLQVLRQLREVSSVPVLILTARSDERSVVRGLRGGADDYLVKPPRIAELMARLETVTRRAAVAAQPPRREVVTGDVRVDLVARVVEVAGSPVPLTQKEFELVEALVERPGAAVSRQQLMDRIWGDAFVAVSRSLDVHMTGLRAKLNRPGLITTIRGYGYRWGQ GT:EXON 1|1-219:0| BL:SWS:NREP 1 BL:SWS:REP 20->216|REGX3_MYCS2|9e-22|39.6|197/228| SEG 3->18|lavvedddgvgdalve| SEG 48->58|ldlglpdgdgl| SEG 107->128|arletvtrraavaaqpprrevv| SEG 131->144|dvrvdlvarvveva| BL:PDB:NREP 1 BL:PDB:REP 20->216|2oqrA|5e-22|33.5|197/226| RP:PDB:NREP 2 RP:PDB:REP 23->105|3cwoX|3e-10|14.5|83/236| RP:PDB:REP 145->217|2d1vA|6e-14|34.2|73/103| RP:PFM:NREP 2 RP:PFM:REP 35->106|PF00072|6e-10|42.3|71/111|Response_reg| RP:PFM:REP 145->216|PF00486|4e-12|48.6|72/77|Trans_reg_C| HM:PFM:NREP 3 HM:PFM:REP 145->217|PF00486|2.6e-25|47.9|73/77|Trans_reg_C| HM:PFM:REP 4->109|PF00072|6.8e-22|33.3|105/112|Response_reg| HM:PFM:REP 101->160|PF04949|0.00039|30.0|60/160|DUF662| GO:PFM:NREP 7 GO:PFM GO:0000156|"GO:two-component response regulator activity"|PF00072|IPR001789| GO:PFM GO:0000160|"GO:two-component signal transduction system (phosphorelay)"|PF00072|IPR001789| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00072|IPR001789| GO:PFM GO:0000156|"GO:two-component response regulator activity"|PF00486|IPR001867| GO:PFM GO:0000160|"GO:two-component signal transduction system (phosphorelay)"|PF00486|IPR001867| GO:PFM GO:0003677|"GO:DNA binding"|PF00486|IPR001867| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00486|IPR001867| RP:SCP:NREP 2 RP:SCP:REP 19->106|1a0oA|5e-10|29.5|88/128|c.23.1.1| RP:SCP:REP 145->217|1gxpA|1e-16|32.9|73/103|a.4.6.1| HM:SCP:REP 1->187|1s8nA_|5.9e-29|30.6|183/190|c.23.1.1|1/1|CheY-like| OP:NHOMO 1341 OP:NHOMOORG 584 OP:PATTERN -------------------------------------------------------------------- 2243A13233325234455-58113655555398A97977352457255222544243--BA83G488873222222212444-----1111---------21111-151----------------1111-11---333771--21321322232331-1-213122442311-1-----1--35133---3-1333334334434523421111344-12515411111144111111111111111111113-2----1-11111111-1----22111111111--111-1111111-------------1--------12221477777762624433212-222224-311857341-22-11111--2-2----1111111-112221334311111111112-1231143122--31122252223433-1-142322323311111111-11--211--------------------------------2-1121-15665654222222422222234345585--225121--5212--231-1-222--------1-14-12-111-121-----322111212113--211-------------------------11111-3-11-1-12222--11111-1121--------1-------122-111111111111-111111111111111111111123--11-11211111111111-1111111-----------------------111131-13-------------------------2-2222--11----1----11-1-11-1----13333322-11343333322211-1--1-11--11------------------------------------2311131333211 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------1---------1------------3---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 200 STR:RPRED 91.3 SQ:SECSTR ##################TccccEEEEEccccccTTHHHHHccccEEEEcccTTccHHHHHHHHHHHccccEEEEccccTHHHHHHHHHTTccEEEEcHHHHHcTHHHHHHHHHHGGGccHHcEEEEcHHHHHHHHHHHHHHHcTEEccccHHHHHHHHHHHHTTTccccHHHHHHHHHcTTccccTHHHHHHHHHHHHHHTccccEEEETTTEEEEc# DISOP:02AL 116-126| PSIPRED cEEEEEEccHHHHHHHHHHHHHcccEEEEEccHHHHHHHcccccEEEEEcccccccHHHHHHHHHHcccccEEEEEccccHHHHHHHHHccccccccccccHHHHHHHHHHHHHcccccccccccEEEEccEEEEcccEEEEEccEEEEccHHHHHHHHHHHHcccccccHHHHHHHHccccccccccEEEHHHHHHHHHcccccEEEEEEcccEEEcc //