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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57678.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  25/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
d.157.1
:249 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   33->230 1e5dA PDBj 2e-08 23.9 %
:RPS:PDB   18->231 1e5dA PDBj 5e-10 20.2 %
:RPS:SCOP  18->231 1e5dA2  d.157.1.3 * 2e-31 23.5 %
:HMM:SCOP  12->230 1x8hA_ d.157.1.1 * 1.9e-26 25.0 %
:HMM:PFM   67->181 PF00753 * Lactamase_B 1e-06 21.7 115/194  
:HMM:PFM   13->46 PF02182 * YDG_SRA 0.0002 26.5 34/155  
:BLT:SWISS 33->230 ROO_DESGI 6e-08 23.9 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57678.1 GT:GENE BAD57678.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(3018301..3019050) GB:FROM 3018301 GB:TO 3019050 GB:DIRECTION - GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD57678.1 LENGTH 249 SQ:AASEQ MGGQRQHRDSIMQTHTDEIADGIYRISTYIPEVGPTGFTFNQFFLDAEEPLLFHTGMRALFPAVTAEIARIRPVEELRWITFGHVEADECGSMNLFLAAAPHAQVAHGALGCAVSLDDMADRPPRPLADGEVIDLGDRRVQHIDTPHAPHNWEARVLYEQTTGVLFCGDLMTQLGDGPALTDADLVEPAAAAEDVFHATSIGPAVPATLRRLAQLAPTTLAIMHGSSFQGDGGTALRDLASVYDDRLTA GT:EXON 1|1-249:0| BL:SWS:NREP 1 BL:SWS:REP 33->230|ROO_DESGI|6e-08|23.9|197/402| SEG 98->109|aaaphaqvahga| BL:PDB:NREP 1 BL:PDB:REP 33->230|1e5dA|2e-08|23.9|197/401| RP:PDB:NREP 1 RP:PDB:REP 18->231|1e5dA|5e-10|20.2|213/401| HM:PFM:NREP 2 HM:PFM:REP 67->181|PF00753|1e-06|21.7|115/194|Lactamase_B| HM:PFM:REP 13->46|PF02182|0.0002|26.5|34/155|YDG_SRA| RP:SCP:NREP 1 RP:SCP:REP 18->231|1e5dA2|2e-31|23.5|213/249|d.157.1.3| HM:SCP:REP 12->230|1x8hA_|1.9e-26|25.0|188/0|d.157.1.1|1/1|Metallo-hydrolase/oxidoreductase| OP:NHOMO 25 OP:NHOMOORG 25 OP:PATTERN -------------------------------------------------------------------- ----1----------------------------1111111----------------------------------------------------------------1--------------------------------------------1---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---------------------------------------------------1----------------------------------------------------------------------------------------------------------------------1------1----1--------1------1---1----------------------------------------------------------------111111-----------------------------------------------------------------------------------------------------------------------------------------------------------------------1-------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 232 STR:RPRED 93.2 SQ:SECSTR #######EcTTccEEEEEEETTEEEEEEEETTccTTcEEEEEEEEcccccEEEccccGGGHHHHHHHHHTTccGGGccEEEEccccHHHHTTHHHHHHHHcccEEEEEHHHHHHHHHccccccEEEEcTTcEEEccccEEEEEEcTTccccTTcEEEEETTTTEEEEETTTccccccccccGGGccHHHHHHHHHHHHHHHTGGGHHHHHHHTTccccEEEEcccccEEcHHHHHHHTT########## DISOP:02AL 1-8| PSIPRED cccccccccccccccHHHHccccEEEEEEccccccccEEEEEEEEEcccEEEEEccccHHHHHHHHHHHHHcccccccEEEEccccccHHHHHHHHHHHccccEEEEccHHHHHHHHHHcccccEEEccccEEEEccEEEEEEEccccccccccEEEEEccccEEEEcHHHHHccccccccccccccccHHHHHHHHHHcHHHHHHHHHHHHHHccccEEEEcccccccccHHHHHHHHHHHHHHHHcc //