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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57688.1
DDBJ      :             putative oxidoreductase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  290/915 : Eukaryota  2/199 : Viruses  0/175   --->[See Alignment]
b.45.1
:179 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   6->162 3cb0D PDBj 5e-28 35.7 %
:RPS:PDB   7->177 3bnkA PDBj 3e-34 16.4 %
:RPS:SCOP  8->165 1rz0A  b.45.1.2 * 8e-43 27.2 %
:HMM:SCOP  4->172 1uscA_ b.45.1.2 * 3.9e-47 32.3 %
:RPS:PFM   23->159 PF01613 * Flavin_Reduct 4e-10 32.4 %
:HMM:PFM   16->165 PF01613 * Flavin_Reduct 5.2e-35 30.0 150/155  
:BLT:SWISS 4->170 HPAC_SALDU 6e-40 44.9 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57688.1 GT:GENE BAD57688.1 GT:PRODUCT putative oxidoreductase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(3025709..3026248) GB:FROM 3025709 GB:TO 3026248 GB:DIRECTION - GB:PRODUCT putative oxidoreductase GB:PROTEIN_ID BAD57688.1 LENGTH 179 SQ:AASEQ MTKQLTAEQRDFRAAMSNLSAAVNVVTTNGPGGRAGITVSAVCSVTDSPPTVLVCVNQSSYTHAIFRRNERLCVNVLSARDEELAGHFAGATGVPMAERFEWAMWDHDTEDIPMLRTAAARVVGRIISDHTQGSHSIFLVSVERVDVRENADALVYFQRRFHHVGTEQESTAWTTRRPA GT:EXON 1|1-179:0| BL:SWS:NREP 1 BL:SWS:REP 4->170|HPAC_SALDU|6e-40|44.9|167/170| BL:PDB:NREP 1 BL:PDB:REP 6->162|3cb0D|5e-28|35.7|157/161| RP:PDB:NREP 1 RP:PDB:REP 7->177|3bnkA|3e-34|16.4|171/186| RP:PFM:NREP 1 RP:PFM:REP 23->159|PF01613|4e-10|32.4|136/150|Flavin_Reduct| HM:PFM:NREP 1 HM:PFM:REP 16->165|PF01613|5.2e-35|30.0|150/155|Flavin_Reduct| RP:SCP:NREP 1 RP:SCP:REP 8->165|1rz0A|8e-43|27.2|151/153|b.45.1.2| HM:SCP:REP 4->172|1uscA_|3.9e-47|32.3|167/178|b.45.1.2|1/1|FMN-binding split barrel| OP:NHOMO 480 OP:NHOMOORG 292 OP:PATTERN -------------------------------------------------------------------- --1-2--1------1------1--2--------11141B7---2-1-1-----2---2--21--111131------------1-------------------------1---------------------------22222---11-------------------------------------11------1-----------------1---------1211------------------------------------------------------------------------------------------------------------------------------------------------------1--1---111112151112-1-141--11-111113-22-32-2-421-63352332251123-11-2-1--122-21222222-1111111------------1111111111111------111-1----323424522223342222213525132------111112-1-3111-------1111111----33--------------------------------------------------------------1-1---1----------------------------------1---1-1111111112-121211121111222122222211111111111111111111121112222--111111111111-----------------1111---1-----11122222141112-111121322-2--1231-----------------------1---------------------------------------------------------------1--------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------1-----9---------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 179 STR:RPRED 100.0 SQ:SECSTR ccGGGcccccccccccccccEEcEEEEEEETTEEEEEEEccEEEEETTTTEEEEEEETTccHHHHHHHHTEEEEEEccGGGHHHHHHHTTccTTTcccTTcccEEccTTccccEETTccEEEEEEEEEEEEcccEEEEEEEEEEEEccGGHccEEEETTTTEEEEccccccTTTGGGGT DISOP:02AL 1-4, 171-179| PSIPRED ccccccccHHHHHHHHHHccccEEEEEEEccccEEEEEEEEEEEEcccccEEEEEEcccccHHHHHHHccEEEEEEccHHHHHHHHHHcccccccHHHHHcccccccccccccEEcccEEEEEEEEEEEEEcccEEEEEEEEEEEEEccccccEEEEccEEEccccccccccccccccc //