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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57689.1
DDBJ      :             putative two-component system sensor kinase
Swiss-Prot:             

Homologs  Archaea  11/68 : Bacteria  427/915 : Eukaryota  2/199 : Viruses  0/175   --->[See Alignment]
a.26.1a.30.2d.110.3d.122.1f.55.1
:507 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   294->505 3d36B PDBj 1e-08 27.5 %
:RPS:PDB   38->150 1dp8A PDBj 2e-10 16.1 %
:RPS:PDB   168->275 1dp8A PDBj 2e-05 14.5 %
:RPS:PDB   286->505 3d36B PDBj 2e-20 22.9 %
:RPS:SCOP  50->294 2axtC1  f.55.1.1 * 2e-10 8.7 %
:RPS:SCOP  267->354 1csgA  a.26.1.2 * 3e-04 7.2 %
:RPS:SCOP  366->505 2c2aA2  d.122.1.3 * 4e-17 27.0 %
:HMM:SCOP  30->141 1ll8A_ d.110.3.5 * 1.2e-14 30.6 %
:HMM:SCOP  139->266 1ew0A_ d.110.3.2 * 1.6e-09 25.2 %
:HMM:SCOP  272->355 2c2aA1 a.30.2.1 * 0.00018 22.0 %
:HMM:SCOP  356->505 1gkzA2 d.122.1.4 * 3e-27 32.0 %
:RPS:PFM   409->505 PF02518 * HATPase_c 4e-07 37.4 %
:HMM:PFM   409->505 PF02518 * HATPase_c 4.1e-14 24.7 93/111  
:HMM:PFM   28->139 PF00989 * PAS 2.2e-06 23.1 108/113  
:HMM:PFM   165->270 PF08448 * PAS_4 1.4e-05 23.5 102/110  
:HMM:PFM   291->354 PF00512 * HisKA 5.8e-06 21.3 61/68  
:BLT:SWISS 15->159 NIFL_KLEPN 8e-05 28.2 %
:BLT:SWISS 136->505 FIXL_BRAJA 2e-34 33.1 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57689.1 GT:GENE BAD57689.1 GT:PRODUCT putative two-component system sensor kinase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(3026328..3027851) GB:FROM 3026328 GB:TO 3027851 GB:DIRECTION - GB:PRODUCT putative two-component system sensor kinase GB:PROTEIN_ID BAD57689.1 LENGTH 507 SQ:AASEQ MPVTAWSGRRYPGPMSVDPRAPELVVSDFVTMMNATEVCVLVHDAETKNILWANPAACAMLGFDLDEIRPLKANDMSSSAQQYDRVIGRAWLQDAVEHGSSRIEWHYRAKSGRVIPTDAVATRIDLAQGPAVMVQFRDIEREQRTEHALRLTTTYVDALARHTATMAFVLDEDGEIRFATDTALTRLGLDPGTELPAGPRLTSYAYLHRAGRRTGWAEVAADADPVAAVRLEVAQPDGTTSWLDGSLERLDDTDVPAFLMLVHDVSDRVRDERKRGLELQRENYLARYTAMGDMAMAIAHELGQPLAAAGNYIAGIRSHLPGGEQLDRRVGIGLDAARKQIDRAATIVATLRAFVGHLEQVDQVADLNDVVTECLYFVRLRAEQHGVVIELDLSPTPVDVRCERVLTGQVIVNLCFNAIDEMAQCPPGARRILLATELRAEGGCFTVRDHGRGVQRDPFLESFTSKSHGSGIGLALSYRIITRQHGTIWCRAAEGGGSIFGFALPTP GT:EXON 1|1-507:0| BL:SWS:NREP 2 BL:SWS:REP 15->159|NIFL_KLEPN|8e-05|28.2|142/495| BL:SWS:REP 136->505|FIXL_BRAJA|2e-34|33.1|360/505| SEG 217->229|aevaadadpvaav| BL:PDB:NREP 1 BL:PDB:REP 294->505|3d36B|1e-08|27.5|200/221| RP:PDB:NREP 3 RP:PDB:REP 38->150|1dp8A|2e-10|16.1|112/118| RP:PDB:REP 168->275|1dp8A|2e-05|14.5|108/118| RP:PDB:REP 286->505|3d36B|2e-20|22.9|210/221| RP:PFM:NREP 1 RP:PFM:REP 409->505|PF02518|4e-07|37.4|91/112|HATPase_c| HM:PFM:NREP 4 HM:PFM:REP 409->505|PF02518|4.1e-14|24.7|93/111|HATPase_c| HM:PFM:REP 28->139|PF00989|2.2e-06|23.1|108/113|PAS| HM:PFM:REP 165->270|PF08448|1.4e-05|23.5|102/110|PAS_4| HM:PFM:REP 291->354|PF00512|5.8e-06|21.3|61/68|HisKA| GO:PFM:NREP 1 GO:PFM GO:0005524|"GO:ATP binding"|PF02518|IPR003594| RP:SCP:NREP 3 RP:SCP:REP 50->294|2axtC1|2e-10|8.7|242/447|f.55.1.1| RP:SCP:REP 267->354|1csgA|3e-04|7.2|83/120|a.26.1.2| RP:SCP:REP 366->505|2c2aA2|4e-17|27.0|137/151|d.122.1.3| HM:SCP:REP 30->141|1ll8A_|1.2e-14|30.6|108/114|d.110.3.5|1/2|PYP-like sensor domain (PAS domain)| HM:SCP:REP 139->266|1ew0A_|1.6e-09|25.2|127/130|d.110.3.2|2/2|PYP-like sensor domain (PAS domain)| HM:SCP:REP 272->355|2c2aA1|0.00018|22.0|82/0|a.30.2.1|1/1|Homodimeric domain of signal transducing histidine kinase| HM:SCP:REP 356->505|1gkzA2|3e-27|32.0|150/193|d.122.1.4|1/1|ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase| OP:NHOMO 1529 OP:NHOMOORG 440 OP:PATTERN ------------------------1----1-1------11111-3--1----1--------------- 4GG-------1---1----------1------1---1-11-1-1-1---------------------1---------------1-111-----1-----------12111--------------1-2-----3231532875334-5-21-------------11-27361------------321----1122222223112332443143343233221-1--------4A1----------------------------------------1-------------------------------------------------32-1--------------------------23328942-1-1-------3434112-----33B4432353364---1------1-65235667266-44425646C58699-114254244244---------121-D31-------------------------------233-22113A456552111165771211133536334-233275323426552136211243----------7782SJ776DE2EEEDC1FCHBCBN2AFAAHI94G--1-----------------12---------613121322222-3323226233442---2311------2---1--2113233312-1221233121132122223212-----212221222221222211111112--1--1111--111-------------116-2------------112----------2155652556344644464---------1---222222372352231311222------7111111-------111---------------------------1--111-1112A1 --------------1--------------------------------------------------------------------------------------------------------------------------------------------------------------------------1------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 481 STR:RPRED 94.9 SQ:SECSTR ##########################ccHHHHHTTcccEEEEEETTcccEEEEcHHHHHHHcccHHHHccGGGGccTTHHHHHHHHHHHHHHHcccccTTTcEEEEEEcTTccEEEEEEEEEEEEETTEEEEEEEEEEcHHHHHHHHHHHHTTccGGGcccTTcccccEEEcTTccEEEccGGGGGTTcccTTTGGGccTTHHHHTccHHHHHHHHHHHTTcccccTTcHHHHHHHHHHHHHHHHHHHHHTTccHHHHTcHHHHHHHHHHHHHHHHHHTTTTccTcEEEccccccccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccEEEEHHHHHHHHHHHHHHHHHHTTEEEEEEccccccEEEEcHHHHHHHHHHHHHHHHHTcTTcEccccEEEEEEEEETTEEEEEEEEccccccHHHHHHTTccGGGccccHHHHHHHHHHHTTcEEEEEEETTTEEEEEEEEEcT DISOP:02AL 11-25| PSIPRED ccccccccccccHHHcccHHHHHHHHHHHHHHHHccccEEEEEEccccEEEEEcHHHHHHHcccHHHHccccHHHcccccccHHHHHHHHHHHHHHcccccEEEEEEEcccccEEEEEEEEEEEEEcccEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEcccccEEEHHHHHHHHHcccHHHHccccccHHccccccHHHHHHHHHHHHHccccEEEEEEEEEcccccEEEEEEEEEEEEccccEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEccHHHHHHHHHHHHHHHHHHcccEEEEEEcccccEEEEcHHHHHHHHHHHHHHHHHHHHcccccccEEEEEEEEEccEEEEEEEEccccccHHHccccccccccccccHHHHHHHHHHHcccEEEEEEEcccEEEEEEEcccc //