[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57717.1
DDBJ      :             putative restriction-modification system endonuclease
Swiss-Prot:             

Homologs  Archaea  1/68 : Bacteria  41/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
:477 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   116->346 PF12082 * DUF3559 2e-27 36.5 %
:HMM:PFM   145->346 PF12082 * DUF3559 4.1e-17 23.0 187/311  
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57717.1 GT:GENE BAD57717.1 GT:PRODUCT putative restriction-modification system endonuclease GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 3056083..3057516 GB:FROM 3056083 GB:TO 3057516 GB:DIRECTION + GB:PRODUCT putative restriction-modification system endonuclease GB:PROTEIN_ID BAD57717.1 LENGTH 477 SQ:AASEQ MRGLRLHWRSARIPACHVQNCHKRSHSEMCDRGRRDGLTSRYAARPKAVRRRTPKLCETRRVDRSAPGFLDSRDEAESLMSRLEATDAVVDGSTRRRIPRRGGGHDGGSDRKRRFRSQSSDEPRCQIRVLVGVSYHDTPTDLRCQQLSSKSAAQATNRHRKAVAQRSWRAAVAEMLEHARRELRSIVGLLDKKKRVVVHTDFTDTLGDIVERDMPEMRSGTDVERYTAKVRDYLRRQPDNLALQKLRSGKPLTAADLESLEELLARSGAGEPDDMARAIDNAHGLGHFIRSLVGLDQQAVQEAFAEFLGERTATASQIDFVNLIIGHLTRHGEMDPKLLFEPPFTDAAPRGRHSCSHPIRRNGWWASSGRSTIPWSRPPDHEQGGARSEQGRSIHELASPAARFGCRSFGRYRGTGVGCTFAINDRGNARSPSELIQQVQSPCVYSERRRRRGSRQCGRKGGVEDVAKSGSRSEKAV GT:EXON 1|1-477:0| SEG 91->114|dgstrrriprrggghdggsdrkrr| SEG 252->265|ltaadlesleella| SEG 448->462|rrrrrgsrqcgrkgg| RP:PFM:NREP 1 RP:PFM:REP 116->346|PF12082|2e-27|36.5|222/297|DUF3559| HM:PFM:NREP 1 HM:PFM:REP 145->346|PF12082|4.1e-17|23.0|187/311|DUF3559| OP:NHOMO 43 OP:NHOMOORG 42 OP:PATTERN --------------------------------------------------1----------------- -----1-------1-------1--------------2-----------------------------------------1-------------------------------------------------------------------1-----1-----------------1------------------------------------------------1-----------------------------------------1----11---------------------11111111111--------------------------------1--------------------1---------------------1-------------------------------------------------------------1---------1-----------------------------------------------------------------------------------------1--------1----1---------------------------------------------------------------------------------1-----------1--------------------------------------------------------------------11----------1--------11----------------------------------1-----------------------------------------------------------------------1---------------------------------------------------------------------1- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-2, 5-6, 27-32, 97-124, 376-395, 446-477| PSIPRED ccccccccccccccHHHHHHHHHHHHHHHHHHHHHcccHHHHHcccHHHHHccHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHccHHHHccccccccccccHHHHHHHHccccccccEEEEEEEEEccccccccccHHHHHHHHHHHHHHHHHHHHcHHHHHcccHHHHHHHHHHHHHHHHHccccccEEEEEccccccccEEEEEcccccccccHHHHHHHHHHHHHHccccHHHHHHHccccccHHHHHHHHHHHHHcccccHHHHHHHHHHHccHHHHHHHHHcccHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHcccccHHHHccccccccccccccccccHHHHHHHHHccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHcccccccEEEEEEccccccccHHHHHHHHHcccHHHHHHHHccHHHHHHcccHHHHHHccccccccc //