[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57731.1
DDBJ      :             putative recombinase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  15/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.53.1
:241 amino acids
:PSIPRED
:DISOPRED
:RPS:SCOP  24->63 1gdtA2  c.53.1.1 * 7e-04 23.7 %
:RPS:PFM   119->238 PF07508 * Recombinase 3e-11 41.5 %
:HMM:PFM   117->238 PF07508 * Recombinase 4.3e-21 33.7 95/102  
:HMM:PFM   23->75 PF00239 * Resolvase 2.1e-06 29.4 51/141  
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57731.1 GT:GENE BAD57731.1 GT:PRODUCT putative recombinase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 3070002..3070727 GB:FROM 3070002 GB:TO 3070727 GB:DIRECTION + GB:PRODUCT putative recombinase GB:PROTEIN_ID BAD57731.1 LENGTH 241 SQ:AASEQ MIGEPERAFYGNQFGLTFPVFVHYGVQLWVPEVGGPIDPDSEAHDLIMSVFGGMSKGERNRIKIRVRAAIAAQAQVEGRYLGGRPPYGYRLADAGPHPNPGKAADGKRLHTLEPDPVTSSVVQRIFSEYLSGVGIFAIAQRLTADNVLCPSAYDRRRNSHRSGAAWSKSAVRAILGSPRYTGYEVWNKQRKQESLIDVDDVALGHQTRLGWNPKKEWVYSDQPAHAALISKDAFERTQLSV GT:EXON 1|1-241:0| SEG 64->76|irvraaiaaqaqv| SEG 78->91|grylggrppygyrl| RP:PFM:NREP 1 RP:PFM:REP 119->238|PF07508|3e-11|41.5|94/103|Recombinase| HM:PFM:NREP 2 HM:PFM:REP 117->238|PF07508|4.3e-21|33.7|95/102|Recombinase| HM:PFM:REP 23->75|PF00239|2.1e-06|29.4|51/141|Resolvase| RP:SCP:NREP 1 RP:SCP:REP 24->63|1gdtA2|7e-04|23.7|38/140|c.53.1.1| OP:NHOMO 19 OP:NHOMOORG 15 OP:PATTERN -------------------------------------------------------------------- ----3---------1------1--1--------1111----1-2----------------21----1------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1----------------------------1-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-4, 64-65| PSIPRED ccccccHHHHHHHHHHHHHHHHHcccEEEEEEcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccEEEccccccccccccccccccEEEEEcHHHHHHHHHHHHHHHccccHHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHcHHHEEEEEEccEEcccccccccccccccccccccccccccEEEEcccccccccHHHHHHHHHHc //