[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57738.1
DDBJ      :             putative dehydrogenase
Swiss-Prot:             

Homologs  Archaea  35/68 : Bacteria  636/915 : Eukaryota  136/199 : Viruses  0/175   --->[See Alignment]
b.35.1c.2.1
:338 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   40->316 1lluA PDBj 2e-33 32.2 %
:RPS:PDB   3->316 2cf5A PDBj 5e-34 27.5 %
:RPS:SCOP  7->198 1kolA1  b.35.1.2 * 9e-26 18.8 %
:HMM:SCOP  7->191 1jqbA1 b.35.1.2 * 2.7e-45 41.5 %
:HMM:SCOP  147->307 1q1nA2 c.2.1.1 * 1.9e-31 31.9 %
:RPS:PFM   40->142 PF08240 * ADH_N 5e-14 41.2 %
:HMM:PFM   36->141 PF08240 * ADH_N 9.4e-32 40.0 105/109  
:HMM:PFM   187->299 PF00107 * ADH_zinc_N 6.8e-13 27.4 113/130  
:BLT:SWISS 40->307 ADH2_BACST 3e-41 36.3 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57738.1 GT:GENE BAD57738.1 GT:PRODUCT putative dehydrogenase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 3075265..3076281 GB:FROM 3075265 GB:TO 3076281 GB:DIRECTION + GB:PRODUCT putative dehydrogenase GB:PROTEIN_ID BAD57738.1 LENGTH 338 SQ:AASEQ MGAVERMRVWRVVEPGPVGSGALRCEREEVPRPGEGELLVRVAACGVCRTDLHVVEGDLSVHRAGVTPGHEVVAEVVAAPMGEQRFPVGSRVGIPWLRYTCGVCRYCRRGAENLCPHSRYTGWDDDGGYAEYATVPADYALALPTGYADEELAPLLCAGIIGYHALLRAQLPEGGVLGIYGFGGSAHLTAQVALAQGARVHVMTRGAAARELAAALGAASVHGATDPPPEPLDAAILFAPAGELVPPALEALDAGGTLAVAGIHLTDVPPLNYQRHLFRERQIRSVTANTRAQAREFLAVAGQHRLRVTTHRYPLDHADRALADLAAGRFDGAAVLVP GT:EXON 1|1-338:0| BL:SWS:NREP 1 BL:SWS:REP 40->307|ADH2_BACST|3e-41|36.3|267/339| SEG 26->39|ereevprpgegell| SEG 205->219|rgaaarelaaalgaa| SEG 318->334|adraladlaagrfdgaa| BL:PDB:NREP 1 BL:PDB:REP 40->316|1lluA|2e-33|32.2|276/341| RP:PDB:NREP 1 RP:PDB:REP 3->316|2cf5A|5e-34|27.5|309/352| RP:PFM:NREP 1 RP:PFM:REP 40->142|PF08240|5e-14|41.2|102/108|ADH_N| HM:PFM:NREP 2 HM:PFM:REP 36->141|PF08240|9.4e-32|40.0|105/109|ADH_N| HM:PFM:REP 187->299|PF00107|6.8e-13|27.4|113/130|ADH_zinc_N| GO:PFM:NREP 1 GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF08240|IPR013154| RP:SCP:NREP 1 RP:SCP:REP 7->198|1kolA1|9e-26|18.8|186/201|b.35.1.2| HM:SCP:REP 7->191|1jqbA1|2.7e-45|41.5|164/0|b.35.1.2|1/1|GroES-like| HM:SCP:REP 147->307|1q1nA2|1.9e-31|31.9|160/0|c.2.1.1|1/1|NAD(P)-binding Rossmann-fold domains| OP:NHOMO 2911 OP:NHOMOORG 807 OP:PATTERN 222-1-35877989A6-42313--9--12131----------------1-11-----1-1-431--22 539-3114333--124433-39224F444444878855A62346946312-1949312--112572C9842----111---27-1-----11-1-----2-2-3-61323--------------221-1-111--114421111332234111--------1--114444-------------3311122-614222222221222222533323222111-51222222113-22222222222222-11211-2----3-----22--1--21211111111112--111111111111111111111111211---111-11--3111111111-32--------1---11----213-1--111121-14124--2-----545663-34433411221222224-75326434442-7775A6787578321-13142-12112333333332653-121-------------------------------3-111--1-B8898B96466997B6666248882433--11712152313114111-1111-1-111111-211-211---1--1-----343122-2-439536221----1111111112111-1-----2311-122224311211211-211111-1111---12--------36241247558788876-575687875658777677334456221323332433422223253233324--211111111111---21111143331--661113-1---------1122112-1-6-66561524434323444111111111--111-----11---23323223334222---3111111--------1--------21--1-------1-----------1-22124- --11853-21---13BBEEEDDDJKFF6646556655545566433C8DLBGQQBC78374657835555453564656644444662-9Q9B5C4B796535869-4116-----------------------------------1----------------24-1-13323-7353173122-4CHJG9C31NMHD3 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 338 STR:RPRED 100.0 SQ:SECSTR TTcccEEEEEEEccTTEEEEccEEEEEEEcccccTTEEEEEEEEEEEcHHHHHHHTcTTTccccccccccEEEEEEEEEccccccccTTcEEEEccEEEcccccHHHHTTcGGGcTTcEETTTcccccccccEEEEGGGEEEccccccHHHHTGGGTHHHHHHHHHHHTcTTcTTcEEEEcccHHHHHHHHHHHHHTcEEEEccTTHHHHHHTTcccccEEETTcHHHHHTEEEEEEccccccccHHHHTTEEEEEEEEEccccccccccccHHHHHHHTcEEEEcccccHHHHHHHHHHHHHTTccccEEEEEGGGHHHHHHHHHTTccccEEEEEc DISOP:02AL 1-2| PSIPRED cccccEEEEEEEEEccccccccEEEEEEEcccccccEEEEEEEEEEEcccEEEEEEcccccccccEEEcccEEEEEEEEcccccccccccEEEEcccccccccccHHccccccccccccEEEEccccccEEEEEEccHHEEEccccccHHHHHHHHcHHHHHHHHHHHcccccccEEEEEcccHHHHHHHHHHHHcccEEEEEEccHHHHHHHHHccccEEEcccccccccEEEEEEccccHHHHHHHHHHHccccEEEEEEEcccccccccHHHHHHccEEEEEEEEccHHHHHHHHHHHHHccccEEEEEEcHHHHHHHHHHHHcccccEEEEEEc //