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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57741.1
DDBJ      :             putative two-component system sensor kinase
Swiss-Prot:             

Homologs  Archaea  1/68 : Bacteria  415/915 : Eukaryota  2/199 : Viruses  0/175   --->[See Alignment]
d.110.2d.122.1
:583 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   65->214 2vzwB PDBj 5e-52 76.9 %
:BLT:PDB   381->581 3gigA PDBj 9e-10 27.7 %
:RPS:PDB   60->212 3eeaB PDBj 5e-14 12.6 %
:RPS:PDB   379->576 3ehjA PDBj 1e-15 24.7 %
:RPS:SCOP  64->219 1mc0A2  d.110.2.1 * 1e-19 21.9 %
:RPS:SCOP  491->559 1pvgA2  d.122.1.2 * 8e-08 10.1 %
:HMM:SCOP  45->215 1mc0A1 d.110.2.1 * 1.3e-33 36.4 %
:HMM:SCOP  216->401 1mc0A1 d.110.2.1 * 7.1e-24 32.2 %
:HMM:SCOP  465->582 1ei1A2 d.122.1.2 * 5.5e-15 23.7 %
:RPS:PFM   502->582 PF02518 * HATPase_c 9e-06 39.7 %
:HMM:PFM   64->204 PF01590 * GAF 2.9e-19 29.7 138/154  
:HMM:PFM   237->373 PF01590 * GAF 2.8e-09 25.2 131/154  
:HMM:PFM   390->453 PF07730 * HisKA_3 1.9e-13 31.2 64/68  
:HMM:PFM   498->582 PF02518 * HATPase_c 1.3e-11 32.9 85/111  
:BLT:SWISS 28->165 NIFA_AZOVI 3e-04 28.7 %
:BLT:SWISS 379->582 LIAS_BACSU 1e-14 28.7 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57741.1 GT:GENE BAD57741.1 GT:PRODUCT putative two-component system sensor kinase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(3077154..3078905) GB:FROM 3077154 GB:TO 3078905 GB:DIRECTION - GB:PRODUCT putative two-component system sensor kinase GB:PROTEIN_ID BAD57741.1 LENGTH 583 SQ:AASEQ MLGMEGRSSRPGSNDRPPVIETLAQSRLRELLAEVQDRIAEIVNVRDQMDRLIEAMLVVTAGLDLDNTLRSIVHTAIELVDAKYGALGVRESDRDSKELAEFVYEGIDDRTRVLIGDLPRGHGVLGLLIDDPRPIRLADMSAHPASVGFPDHHPPMRTFLGVPVQVGGEVFGNLYLTEKAGGHEFTEDDEVVVQALAAAAGIAIANARLYEESRIRQQWLEATQQVATRLLAGGETSEVFTVITERALALTGSACAFLALPEDPDVPPEDLTELVVVAAAGADADTLTGTRLPMDETHTGVAFRDGRPLAVDTADAPSFATSLEYGPVLTLPLRAGNAVVGLLTTMRALGMPPVDAAGQAMMSAFADQAALALQMAATQRRMRELDVVSERDRIARDLHDHVIQRLFAVGLSLQSTVSRARAPEIKTRLMDTVNDVQSIVQEIRHSIFDLHSSSAAEAPALRKRLHAVLAEMTEETDLRTSIRLSGPVSVLAPAMFDDVEAVLREAVSNVVRHAKASSLSVRLTIRDDVELEIVDNGIGLPEDLPRRSGLANMAARTEKAGGTFRAERGRDGGTVIHWSVPLP GT:EXON 1|1-583:0| BL:SWS:NREP 2 BL:SWS:REP 28->165|NIFA_AZOVI|3e-04|28.7|122/522| BL:SWS:REP 379->582|LIAS_BACSU|1e-14|28.7|195/360| SEG 195->207|alaaaagiaiana| SEG 260->290|lpedpdvppedltelvvvaaagadadtltgt| SEG 359->377|qammsafadqaalalqmaa| BL:PDB:NREP 2 BL:PDB:REP 65->214|2vzwB|5e-52|76.9|147/149| BL:PDB:REP 381->581|3gigA|9e-10|27.7|191/212| RP:PDB:NREP 2 RP:PDB:REP 60->212|3eeaB|5e-14|12.6|151/151| RP:PDB:REP 379->576|3ehjA|1e-15|24.7|182/196| RP:PFM:NREP 1 RP:PFM:REP 502->582|PF02518|9e-06|39.7|78/112|HATPase_c| HM:PFM:NREP 4 HM:PFM:REP 64->204|PF01590|2.9e-19|29.7|138/154|GAF| HM:PFM:REP 237->373|PF01590|2.8e-09|25.2|131/154|GAF| HM:PFM:REP 390->453|PF07730|1.9e-13|31.2|64/68|HisKA_3| HM:PFM:REP 498->582|PF02518|1.3e-11|32.9|85/111|HATPase_c| GO:PFM:NREP 1 GO:PFM GO:0005524|"GO:ATP binding"|PF02518|IPR003594| RP:SCP:NREP 2 RP:SCP:REP 64->219|1mc0A2|1e-19|21.9|151/154|d.110.2.1| RP:SCP:REP 491->559|1pvgA2|8e-08|10.1|69/239|d.122.1.2| HM:SCP:REP 45->215|1mc0A1|1.3e-33|36.4|165/0|d.110.2.1|1/2|GAF domain-like| HM:SCP:REP 216->401|1mc0A1|7.1e-24|32.2|174/0|d.110.2.1|2/2|GAF domain-like| HM:SCP:REP 465->582|1ei1A2|5.5e-15|23.7|118/219|d.122.1.2|1/1|ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase| OP:NHOMO 728 OP:NHOMOORG 418 OP:PATTERN --------------------------------------------------1----------------- 425-31--2212--14322-22--46222222633327972236-33-2----121-1--22613523841-----------------1------------2---2-11--------------------1------24435121623--3---1-------------221-------------222-----224223234331532433334426363-21431111111157111111111111111-22-21---21-1------1111-1-1-111111111111111111111111111111111111111111-1112-2-1-------------------1-1--6----22----22-11------11-----------1--2--21--1-----------1-11-11-21----111-------11---1-1-------1-----------------------------------------------------11---1111-1------331111111-22-51--33225-11-1-2112211524-1--------1-3-3-12---11--1----2-11-2--21111-1-2----------------------------------11--2-----1111111112122----1--------111111-1111111111-111111111111111111211122111222122222222221111111111--111111-11111---1-----------1----------------1------------22122123-1211-111-----------1-1-------121111-1--112----11------11-----------------------------------------------8- -------------------------------------------------------------------------------------------------------------------------------1------------------------------------------------------------------1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 393 STR:RPRED 67.4 SQ:SECSTR ##########################HHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHGcccccHHHHHHHHHHHHHHHccccEEEEEEEcccEEEEEEEcccccGGGHHHHHHccccTTTcHHHHHHHHHTccEEEccGGGcTTccHHHHHHTTTEEEEEEEEEETTEEEEEEEEEEETTcccccHHHHHHHHHHHHHHHHHHHHHHHHTccc####################################################################################################################################################################HHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTcHHHHHHHHHHHHHHHHHHHHHTTTccccHHHHHHHHHHHHHHTTcEEccccccccEEcccccccccccHHHHHHHHHHHHHHHHHHHHTcccEEEEEEEEcccEEEEEEEcccccccTHTcccHHHHHHHHHHHTTcEEEEEccccEEEEEEEEEEcc DISOP:02AL 1-13| PSIPRED ccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHcccEEEEEEEEccccHHHHHHHHcccccHHHHHHHHcccccccHHHHHHHcccEEEEcccccccccccccccccccEEEEEEEEEEccEEEEEEEEEEccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHccHHHHHHHccccHHHHccccccccccHHHHHHHcccEEEEEHHcccHHHcccccccEEEEEEEccccccEEEEEEEccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHcccEEEEEEccccccccHHHHHHHHHHHHHHHHHHHccccccEEEEEEEEccEEEEEEEEccccccccccccccHHHHHHHHHHHccEEEEEEcccccEEEEEEEccc //