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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57743.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  1/68 : Bacteria  62/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
d.90.1
:335 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   10->46 2b67A PDBj 4e-04 43.2 %
:RPS:PDB   16->134 1bkjA PDBj 5e-07 12.6 %
:RPS:PDB   226->330 1bkjA PDBj 4e-05 15.6 %
:RPS:SCOP  16->91 1zchA1  d.90.1.1 * 5e-06 11.8 %
:RPS:SCOP  203->330 1vfrA  d.90.1.1 * 4e-08 13.0 %
:HMM:SCOP  16->91 2b67A1 d.90.1.1 * 1.2e-05 27.6 %
:HMM:SCOP  122->325 1vkwA_ d.90.1.2 * 2e-06 26.0 %
:HMM:PFM   17->41 PF00881 * Nitroreductase 1.8e-05 40.0 25/165  
:HMM:PFM   59->105 PF00881 * Nitroreductase 7.9e-05 22.2 45/165  
:HMM:PFM   234->310 PF00881 * Nitroreductase 1.5e-06 28.8 73/165  
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57743.1 GT:GENE BAD57743.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 3079780..3080787 GB:FROM 3079780 GB:TO 3080787 GB:DIRECTION + GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD57743.1 LENGTH 335 SQ:AASEQ MRQTTTKDGHMHRGLPDDSTVATALALAGRAPSVHNVQPWRWRIDRHSVHLYLDPARALPRTDPDRRDVVISCGAALHHLTVAFTAMGWASAVTRLPDPADENHLATIRLVPHRATGHDIAMSAAIPQRRTDRRRYAPLPLPPGYPGLLAERAAALGAMVRVVDQPARRRLVAAARAAADRHALDPEYGFELALWSGRHSSDDGVPARNTPAPRAGDELPARRFAAPRLLDPATDLDHADLLVLATPCDDRRARLRAGEALSAVLLTATNIGLATCPLTEPLEVGEQRDLVRRGVLNGTAHPQAVLRVGWAPADAEPLPRTPRRPVTDVVLRDEN GT:EXON 1|1-335:0| SEG 136->158|yaplplppgypgllaeraaalga| SEG 167->183|arrrlvaaaraaadrha| BL:PDB:NREP 1 BL:PDB:REP 10->46|2b67A|4e-04|43.2|37/198| RP:PDB:NREP 2 RP:PDB:REP 16->134|1bkjA|5e-07|12.6|119/230| RP:PDB:REP 226->330|1bkjA|4e-05|15.6|100/230| HM:PFM:NREP 3 HM:PFM:REP 17->41|PF00881|1.8e-05|40.0|25/165|Nitroreductase| HM:PFM:REP 59->105|PF00881|7.9e-05|22.2|45/165|Nitroreductase| HM:PFM:REP 234->310|PF00881|1.5e-06|28.8|73/165|Nitroreductase| RP:SCP:NREP 2 RP:SCP:REP 16->91|1zchA1|5e-06|11.8|76/249|d.90.1.1| RP:SCP:REP 203->330|1vfrA|4e-08|13.0|123/217|d.90.1.1| HM:SCP:REP 16->91|2b67A1|1.2e-05|27.6|76/0|d.90.1.1|1/2|FMN-dependent nitroreductase-like| HM:SCP:REP 122->325|1vkwA_|2e-06|26.0|146/217|d.90.1.2|1/1|FMN-dependent nitroreductase-like| OP:NHOMO 134 OP:NHOMOORG 63 OP:PATTERN ---------------------------------------------------1---------------- --------------13333-34--5433333247772223-112----------------222-416-21------------------------------------------------------------------------------------------------------------------------------------1--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-----------------------------------------1--1--1-11111211111-1-11--1----------------------------------------1----1------1----------1111----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1----------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 227 STR:RPRED 67.8 SQ:SECSTR #########ccccccccHHHHHHHHHHHHTcccGGGcccEEEEEccEEEEEEEEcHHHHHHcTTccccHHHHHHHHHHHHHHHHHHTTcEEEEEGGGGGGHHHHHHHTTccTTEEEEEEEEEcccccccccccc###########################################################################################ccEEEEEEEEcTTTccEEEEEEEccccTTHHHHHHHHHHHHHHHHTTcEEEEEcTTTTTcHHHHHHHHHHccTTcEEEEEEEEEcc###cTTcccccccccTTcc##### DISOP:02AL 1-8| PSIPRED cccccccccccccccccHHHHHHHHHHHHHccccccccEEEEEEEccEEEEEEccccccccccccHHHHHHHHHHHHHHHHHHHHHccccEEEEEcccccccccEEEEEEEcccccccHHHHHHHHHHHcccccccccccccHHHHHHHHHHcccccEEEEEEcHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHcccccccccccHHHccccccHHHHHHHHHcccccccccccccccEEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHccccccEEEEEEEcccccccccccccccccHHHEEEcccc //