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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57744.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  31/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.26.2
:293 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   6->289 3cisG PDBj 4e-17 25.5 %
:RPS:PDB   5->291 3cisC PDBj 2e-18 24.4 %
:RPS:SCOP  7->142 1mjhA  c.26.2.4 * 3e-04 14.7 %
:HMM:SCOP  3->142 2gm3A1 c.26.2.4 * 9.9e-20 29.3 %
:HMM:SCOP  153->291 2gm3A1 c.26.2.4 * 7.7e-29 31.7 %
:HMM:PFM   6->142 PF00582 * Usp 2.3e-16 25.4 134/140  
:HMM:PFM   156->291 PF00582 * Usp 2.1e-26 30.9 136/140  
:BLT:SWISS 4->289 Y2028_MYCBO 2e-13 27.7 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57744.1 GT:GENE BAD57744.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(3080850..3081731) GB:FROM 3080850 GB:TO 3081731 GB:DIRECTION - GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD57744.1 LENGTH 293 SQ:AASEQ MAAHPLVVGVDDSAASDLAVRWAAETAAARGRPLRLVHALDLAATRAVFGPYALLVPSVTAEFRQQGVEYLAAAAQLATETAPGCAVDTELVEGSAAEVLIDRSDFAAMTVLGTGNAGALGYLGSTLSAVVAHGHGPITVVRASGNDTSIRRCGPVVVGVDGSAHNRAAVELAFAEAAERRATLVAVHCWSDLRFEQLTGLPDTIADREIETTSHELLADALDGWADKYPQVRVTRKVYLSGPRHHLREWSKPAQLLVVGSRGRGGFGRLLVGSVGNALVQQAHCPVMVVHTP GT:EXON 1|1-293:0| BL:SWS:NREP 1 BL:SWS:REP 4->289|Y2028_MYCBO|2e-13|27.7|282/295| SEG 19->32|avrwaaetaaargr| SEG 71->82|laaaaqlateta| SEG 167->182|raavelafaeaaerra| SEG 256->276|llvvgsrgrggfgrllvgsvg| BL:PDB:NREP 1 BL:PDB:REP 6->289|3cisG|4e-17|25.5|275/292| RP:PDB:NREP 1 RP:PDB:REP 5->291|3cisC|2e-18|24.4|283/290| HM:PFM:NREP 2 HM:PFM:REP 6->142|PF00582|2.3e-16|25.4|134/140|Usp| HM:PFM:REP 156->291|PF00582|2.1e-26|30.9|136/140|Usp| RP:SCP:NREP 1 RP:SCP:REP 7->142|1mjhA|3e-04|14.7|129/143|c.26.2.4| HM:SCP:REP 3->142|2gm3A1|9.9e-20|29.3|140/0|c.26.2.4|1/2|Adenine nucleotide alpha hydrolases-like| HM:SCP:REP 153->291|2gm3A1|7.7e-29|31.7|139/0|c.26.2.4|2/2|Adenine nucleotide alpha hydrolases-like| OP:NHOMO 94 OP:NHOMOORG 31 OP:PATTERN -------------------------------------------------------------------- -----1--111--1-2233-32--5333333325553593--------------------32---24-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 293 STR:RPRED 100.0 SQ:SECSTR ccTTEEEEEccccHHHHHHHHHHHHHHHHHTccEEEEEEcccccccTTcccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccEEEEEEcccHHHHHHHHGGGEEEEEEEcccTTccTcccHHHHHHHHHccccEEEEcTTcccccccccccEEEEccccHHHHHHHHHHHHHHHHTTccEEEEEEccccccTTcccccHHHHHHHHHHHHHHHHHHHHTTHHHHcTTccEEEEEEcccHHHHHHHHGGGccEEEEEcccccccTTccccHHHHHHHHHccccEEEEccc PSIPRED cccccEEEEEcccHHHHHHHHHHHHHHHHcccEEEEEEEEccHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEcccHHHHHHHHHccccEEEEEcccccccccHHHHHHHHHHHccccEEEEEccccccccccccEEEEEEcccHHHHHHHHHHHHHHHHcccEEEEEEEEEccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEEEccHHHHHHHHHHHccEEEEEcccccccHHHcccHHHHHHHHHccccEEEEccc //