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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57749.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  10/68 : Bacteria  432/915 : Eukaryota  26/199 : Viruses  0/175   --->[See Alignment]
c.26.2d.153.1
:587 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   92->374,465->510 1jgtA PDBj 6e-16 32.1 %
:RPS:PDB   92->360,450->552 1ct9B PDBj 8e-40 28.6 %
:RPS:SCOP  92->215 1q15A2  d.153.1.1 * 2e-11 17.8 %
:RPS:SCOP  209->360,448->548 1ct9A1  c.26.2.1 * 9e-30 30.3 %
:HMM:SCOP  11->215 1q15A2 d.153.1.1 * 1.1e-44 33.2 %
:HMM:SCOP  207->576 1q15A1 c.26.2.1 * 1e-74 39.0 %
:RPS:PFM   92->193 PF09147 * DUF1933 2e-06 35.1 %
:RPS:PFM   228->510 PF00733 * Asn_synthase 2e-35 42.4 %
:HMM:PFM   228->510 PF00733 * Asn_synthase 9.7e-58 32.8 265/269  
:BLT:SWISS 92->533 ASNB_BACSU 5e-35 25.8 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57749.1 GT:GENE BAD57749.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(3084218..3085981) GB:FROM 3084218 GB:TO 3085981 GB:DIRECTION - GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD57749.1 LENGTH 587 SQ:AASEQ MSRWCAFLTEDDPAAHVRAVGAEPITAGPITAGSITAAGPHGFGLLDGPGVAAGPFTAGALTAVGEVTLFNADRLRARLGADAPPPGRPDGEVLLHSYARFGLDGIAAAEGMFALAVADGPDLVLLRDQLGARTLFHARARAGWAASTSLRALRRWPALRTGLHLPAVRSFLTFAYLPGRETLLRDVHEVLPGRCLRLHPDGTSTEHTYWEPREHIDERPASEHALRLRALLEDAVTRRLPAGEPVGVLLSGGIDSSLVTALAAKLHDQAVHTYSISFGADAPDELGYSGLVATHCHTRHRVLTVPGQTVAARLADTVGLLDSPVGDPLTVPNLMLAEAVAADGIRVALNGEGGDPVFGGPKNLPMLIFELTRDDPAEDARAHAYLDSYRKCYADLPALLTRDALAALADAPGPVEHVAPYLRPGAMTSLLNQLLHTNLRTKGAHHILTKVERLTAASGIEGRAPLFDRAVVDHAFAVPPTMKLAGTSEKWILKQAVRDLLPKTIVDRPKSGMRVPVQQWLDGPLRELAHDLLLGRTARERGLFRADTIRAWLRGEGALLPRQGGKLWLVLSLQLWLRSFDLEESVR GT:EXON 1|1-587:0| BL:SWS:NREP 1 BL:SWS:REP 92->533|ASNB_BACSU|5e-35|25.8|434/632| SEG 72->91|adrlrarlgadapppgrpdg| SEG 394->411|adlpalltrdalaalada| SEG 567->577|lwlvlslqlwl| BL:PDB:NREP 1 BL:PDB:REP 92->374,465->510|1jgtA|6e-16|32.1|311/490| RP:PDB:NREP 1 RP:PDB:REP 92->360,450->552|1ct9B|8e-40|28.6|335/495| RP:PFM:NREP 2 RP:PFM:REP 92->193|PF09147|2e-06|35.1|97/162|DUF1933| RP:PFM:REP 228->510|PF00733|2e-35|42.4|236/237|Asn_synthase| HM:PFM:NREP 1 HM:PFM:REP 228->510|PF00733|9.7e-58|32.8|265/269|Asn_synthase| GO:PFM:NREP 2 GO:PFM GO:0004066|"GO:asparagine synthase (glutamine-hydrolyzing) activity"|PF00733|IPR001962| GO:PFM GO:0006529|"GO:asparagine biosynthetic process"|PF00733|IPR001962| RP:SCP:NREP 2 RP:SCP:REP 92->215|1q15A2|2e-11|17.8|118/204|d.153.1.1| RP:SCP:REP 209->360,448->548|1ct9A1|9e-30|30.3|245/305|c.26.2.1| HM:SCP:REP 11->215|1q15A2|1.1e-44|33.2|202/204|d.153.1.1|1/1|N-terminal nucleophile aminohydrolases (Ntn hydrolases)| HM:SCP:REP 207->576|1q15A1|1e-74|39.0|292/0|c.26.2.1|1/1|Adenine nucleotide alpha hydrolases-like| OP:NHOMO 756 OP:NHOMOORG 468 OP:PATTERN ---1------------------------------1-11-1---1--1--1----1-----1------- 2-4-211111111112211-12111211111122222122-2111------1-----2--45--232-11-1-------12---1-1-111111-----1-2-2123------------------1--------312--54---3-2113-------1111-1--2---31--1-1------11-------13233333333333333321222233422221--11111131---------------------1111111111221111111---111--------------------------------------------11-11-------1-1-211----1-1--1111111411115112211---112---1-------233----2-31----------1-11121311241-2---1-2---221-------1111---111111111--11437------------------------------1111-14412111111-233111--33331211--1-------112---114-1--33-1-31-------232433--111-3213222-1312121--31211-52-31-2----------------231211----111-11-11----311111-1211-11---4314--------11-1-------------------------------1111111-1-111-11--1111-12---------111111111111---122222----3-4------------------------2111-331531121111211121111111111111-11111111112211211111----114-----------------------------------------------1-------- -----------------1-1---2-21-1-----1--------11----11-----1-1--------------------------------------------2-----1---------------------------------------------------2-----11---------2L2221-----1----2---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 514 STR:RPRED 87.6 SQ:SECSTR ##############################ccccccGGGcccEEEcccccEE########EEEEEEETTHHHHHHHHHHTTccccccccHHGHHHHHHHHHGGGcGGGccEEEEEEEEETTEEEEEEcTTcccccEEEEcTTcEEEEccGGGTTTTccEEEEccTTcEEEEccccEEEEcccTccEEEEccTTEEEETTTccEEccccGGGcHHHHTTccccHHHHHHHHHHHHHHHHTTcccccEEEEccccHHHHHHHHHHHHHcccccEEEEEEcEETTcHHHHHHHHHHHHHTcEEEEEEccHHHHHTTHHHHHHHHccHHHHHHHHHHHHHHHHHHHTTccEEEccTTHHHHHTcccccccccTTccHHHHHHHHHHHHHHccccHHHHHHHHHHHHTcccHHHHHHHHHHHcccccccHHHHHHHHcccHHHHHHHHHGTHHHHHHHHHHTTTcEEEcGGGcHHHHHHHTTccGGGGcccccTTHHHHHHHTTTccHHHHTccccccccHTcHHHHHHHHHHHHHHccHHHHHTHHHHcccccccc################################### DISOP:02AL 585-586| PSIPRED cEEEEEEcccccHHHHHHHHHHHHHHcccccccEEEEEccccEEEEccccccccccccccEEEEEEEEEEcHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHcccEEEEEEEcccEEEEEccccEEEEEEEEEccEEEEEEcHHHHHHcccccccccHHHHHHHHHHcccccccHHHccHHHcccccEEEEEccccEEEEEEEccccccccccHHHHHHHHHHHHHHHHHHHHcccccEEEEEEccHHHHHHHHHHHHHcccccEEEEEEcccccccHHHHHHHHHHHHcccEEEEEEcHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHcccEEEEEccccHHHccccHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHccHHHHHcccccHHHHHHHHHHcccHHHHHcccccccccHHHHHHHHHHHHHHHHHcHHHHHHcccccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHccHHHHcc //