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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57757.1
DDBJ      :             putative peptidase
Swiss-Prot:             

Homologs  Archaea  38/68 : Bacteria  425/915 : Eukaryota  140/199 : Viruses  0/175   --->[See Alignment]
c.56.5d.58.19
:452 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   52->176 1q7lC PDBj 4e-15 39.3 %
:RPS:PDB   17->451 3dljA PDBj 5e-45 15.3 %
:RPS:SCOP  17->172 1vgyA1  c.56.5.4 * 3e-31 29.2 %
:RPS:SCOP  214->347 1vgyA2  d.58.19.1 * 2e-07 24.5 %
:HMM:SCOP  18->451 1lfwA1 c.56.5.4 * 1.2e-55 35.1 %
:RPS:PFM   89->172 PF01546 * Peptidase_M20 7e-08 34.9 %
:HMM:PFM   89->450 PF01546 * Peptidase_M20 1.6e-32 35.3 150/171  
:BLT:SWISS 78->449 P20D1_MOUSE 2e-28 29.9 %
:PROS 88->97|PS00758|ARGE_DAPE_CPG2_1
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57757.1 GT:GENE BAD57757.1 GT:PRODUCT putative peptidase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 3092365..3093723 GB:FROM 3092365 GB:TO 3093723 GB:DIRECTION + GB:PRODUCT putative peptidase GB:PROTEIN_ID BAD57757.1 LENGTH 452 SQ:AASEQ MSATGEVTGPNNSRAVAEVVELVSRLIRFDTSNTGDLATTKGEQECAEWVGEKLREVGYTTEYVESGAPGRGNIFARLPGADPGRGALMMHGHLDVVPAQASDWSVHPFSGAVRDGYVWGRGAIDMKDMVGMMLAVARQFKAEGTVPPRDIVFAFLADEENGGRWGSQWLVDNRPDLFAGVTEAVGEVGGFSLTVPRRDGGERRLYLVETAEKGLGWMRLRAKARAGHGSFLHEDNAVTILAQAVARLGTHTFPLVLSDSVAEFLAVVAEETGLPFDPTGPDIEGQLAKLGTISRIIGATLRDTANPTMLQAGYKANVIPQTAEAVVDCRVVPGRQAAFEREVDELIGPDVEREWITKLDSYETTFDGHLVDAMNEAILAHDPEGRTVPYMLSGGTDAKAFARLGIRCFGFAPLRLPPDLDFSALFHGVDERVPVDALEFGTRVLEHFLLHS GT:EXON 1|1-452:0| BL:SWS:NREP 1 BL:SWS:REP 78->449|P20D1_MOUSE|2e-28|29.9|361/503| PROS 88->97|PS00758|ARGE_DAPE_CPG2_1|PDOC00613| SEG 179->190|agvteavgevgg| BL:PDB:NREP 1 BL:PDB:REP 52->176|1q7lC|4e-15|39.3|122/190| RP:PDB:NREP 1 RP:PDB:REP 17->451|3dljA|5e-45|15.3|419/471| RP:PFM:NREP 1 RP:PFM:REP 89->172|PF01546|7e-08|34.9|83/308|Peptidase_M20| HM:PFM:NREP 1 HM:PFM:REP 89->450|PF01546|1.6e-32|35.3|150/171|Peptidase_M20| GO:PFM:NREP 2 GO:PFM GO:0008152|"GO:metabolic process"|PF01546|IPR002933| GO:PFM GO:0016787|"GO:hydrolase activity"|PF01546|IPR002933| RP:SCP:NREP 2 RP:SCP:REP 17->172|1vgyA1|3e-31|29.2|144/262|c.56.5.4| RP:SCP:REP 214->347|1vgyA2|2e-07|24.5|94/113|d.58.19.1| HM:SCP:REP 18->451|1lfwA1|1.2e-55|35.1|248/0|c.56.5.4|1/1|Zn-dependent exopeptidases| OP:NHOMO 905 OP:NHOMOORG 603 OP:PATTERN 112--2-211111111-2--1--1------1----11-1111111111------1-2111211---1- -17-221-111--121111-1111111111111111231122111111111-111112--11213214542-------1---1---------------------1---2---------------------------1112-----2-------------------------------------111----2--111111111-1111-11---1-111--13-1-------3----------------------------------11-------1------------------------------------------------1--------------2------2----1-----1-----1------1--4-13333-----1-133---2213111111111112-12-21124-23-2221--22-2211-121112323323111111111-111-11-------------------1------11-11-221112212211122211112233111111224211311332--1--2-4-4311--1-1211111111---11--21--1-1111111--------------1-11---------------------1---1111-11-111--1-------111-21--------11-1------1121-1-1111111111-111111111111111111235211111111111111111111111111111-11111111111111-111111112231--1211111-11111------1----221--11111111-1111-112-------------------11------1-11----1-1----111111--------1----------------------------11111-11112- ----332-411---21-1-21111112------2121111111------1-12121-1----2-1131----11-1-11112111-1--391-13133241-1----1-3914334321-122232212A92-333-11-4-25-12-212113211232142232482312313132-----112--31311122221 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 436 STR:RPRED 96.5 SQ:SECSTR ###############HHHHHHHHHHHHTccccccccHHHHHHHHHHHHHHHHHHHHTTcEEEEEcccEEEcccEEEEEEcccTTccEEEEEEEcccccccGGTccccTTccEEETTEEEcTTTTTTHHHHHHHHHHHHHHHHTTcccccEEEEEEEccGGGTTTTHHHHHHHHTTTTcTTccEEEEccccccccccccccccccEEEEEEcEEEEEEEEEEcccccEETTTcTTccHHHHHHHHHTTcccTTcccccTTTTTTcccccHHHHHHHHHHTccccccccHHHHHHHHHTccEEEEEEEEccccccccccEEccEEEEEEEEEEcTTHHHHHHHHHTTccccEEEEEEEEEEccEEccTTcHHHHHHHHHHHHHHHccccEEEEEccccHHHHHHHHHTccEEcccccccccTTTTccTTcTTcEEEHHHHHHHHHHHHHHHHH# DISOP:02AL 1-4, 7-8| PSIPRED cccccccccccHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHcccEEEEEEcccccccEEEEEEccccccccEEEEEccccEEccccccccccccccEEEccEEEEcccccccHHHHHHHHHHHHHHHcccccccEEEEEEEEcccccHHHHHHHHHHHHHHHccccEEEEEccccccccccccccccccccEEEEEccccEEEEEEEEEccccccccccccHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHccccccHHHHHHHHHHHcccHHHHHHcccccEEEEEEEEcccEEEEEEEEEEEEEEEEEcccccHHHHHHHHHHHcccEEEEEEEccccccccccHHHHHHHHHHHHHHccccccccEEEccccHHHHHHHHcccEEEEEcccccccccccccccccccEEcHHHHHHHHHHHHHHHHcc //