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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57760.1
DDBJ      :             putative GTP cyclohydrolase II
Swiss-Prot:             

Homologs  Archaea  10/68 : Bacteria  675/915 : Eukaryota  112/199 : Viruses  0/175   --->[See Alignment]
c.144.1
:256 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   18->172 2bz0B PDBj 1e-21 42.5 %
:RPS:PDB   42->172 2bz1A PDBj 3e-09 41.1 %
:RPS:SCOP  15->172 2bz0A1  c.144.1.1 * 1e-29 39.7 %
:HMM:SCOP  20->176 2bz1A1 c.144.1.1 * 7.2e-34 44.9 %
:RPS:PFM   15->167 PF00925 * GTP_cyclohydro2 2e-25 44.4 %
:HMM:PFM   20->168 PF00925 * GTP_cyclohydro2 3.6e-49 43.9 148/169  
:BLT:SWISS 44->198 RIBA_NEIMA 2e-27 43.8 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57760.1 GT:GENE BAD57760.1 GT:PRODUCT putative GTP cyclohydrolase II GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(3096353..3097123) GB:FROM 3096353 GB:TO 3097123 GB:DIRECTION - GB:PRODUCT putative GTP cyclohydrolase II GB:PROTEIN_ID BAD57760.1 LENGTH 256 SQ:AASEQ MTTVDPGTDTAHRLTRKGAELTVRVRELPADRDGGSVLVFGEIGQDCLVRIHSRCLYGDALQSDDCDCGPELERSMDLIQAEGRGVLVYLDQEGRGAGLVAKARGLREAERTGADTFTAYTRLGYPEDARSFRLAAAAIAELGLRRVRLLTNNPDKAAALTDLGVAVTVVPLTTRPRSARARKYLQDKRAHRRHWLPEPSAPWAAGLAGPESTMVLPVLPDDAGWDEDGAGAVGGTRRSRWGWLRGEGAGTAARRS GT:EXON 1|1-256:0| BL:SWS:NREP 1 BL:SWS:REP 44->198|RIBA_NEIMA|2e-27|43.8|153/197| SEG 129->146|arsfrlaaaaiaelglrr| SEG 221->235|ddagwdedgagavgg| BL:PDB:NREP 1 BL:PDB:REP 18->172|2bz0B|1e-21|42.5|153/173| RP:PDB:NREP 1 RP:PDB:REP 42->172|2bz1A|3e-09|41.1|129/170| RP:PFM:NREP 1 RP:PFM:REP 15->167|PF00925|2e-25|44.4|151/169|GTP_cyclohydro2| HM:PFM:NREP 1 HM:PFM:REP 20->168|PF00925|3.6e-49|43.9|148/169|GTP_cyclohydro2| GO:PFM:NREP 2 GO:PFM GO:0003935|"GO:GTP cyclohydrolase II activity"|PF00925|IPR000926| GO:PFM GO:0009231|"GO:riboflavin biosynthetic process"|PF00925|IPR000926| RP:SCP:NREP 1 RP:SCP:REP 15->172|2bz0A1|1e-29|39.7|151/168|c.144.1.1| HM:SCP:REP 20->176|2bz1A1|7.2e-34|44.9|156/0|c.144.1.1|1/1|RibA-like| OP:NHOMO 910 OP:NHOMOORG 797 OP:PATTERN -----------------------1-----1------------------1------1-111-111---- 1221311111111111111-1111111111111111211411111-111111-211111122312134311----1-----11111111111-111---1-----1111111111111111111111111111111122--111111111112--111111111111111111111111111111111---1111111121311112111111211111111111------1311111111111111111111--1----1---1111----111-111111-------11111111111-----------------------11-11111111111111111111-111--1111111111211111-1-11111-11---------------------------------1--1----------11------11---1111111111111111111111-1111111111111---------------1111-11111-----111-122222211112222-21111111-----3----------11--1-21-1111111---1---11111111111111212311111332312111111111111111111111111111--1111112-11111111111111111111111------11-11111111111111111111-1111111111111111111111112211111111111111111111111111111111111121111111111111111-12111111111111111111111111112111111211111111111111111111-1112111112212211111111111111--11111111----------1----------------1--------11-111-1111-1 ------1-----1111-111111111111-111111111111111111111111111-111111111111111111111111111111-121-111----121121-13------------------------------------------------------------------1112N2211112451221121111 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 154 STR:RPRED 60.2 SQ:SECSTR #################EEEEEEEEEETTTccEEEE#EEEccccccEEEEEEEccHHHHTcccccccHHHHHHHHHHHHHHHTcEEEEEEccHHHHTcHHHHHHHHHHHHTTcccHHHHHHHTTccccccccTHHHHHHHHTTcccEEEEcccHHHHHHHHHTTccEEEEcc#################################################################################### DISOP:02AL 251-256| PSIPRED cccEEEEEEEEEEcccccccEEEEEEEccccccEEEEEEEccccccccEEEEccccHHHHHHcccccccHHHHHHHHHHHHccccEEEEEccccccHHHHHHHHHHHHHHHccccHHHHHHHcccccccHHHHHHHHHHHHccccEEEEEcccHHHHHHHHHcccEEEEEEEEEEcccHHHHHHHHHHHHHHcccccccccHHcccccccccccccccccccccccccccccccccccccccEEEccccccccccc //