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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57761.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  7/68 : Bacteria  128/915 : Eukaryota  14/199 : Viruses  0/175   --->[See Alignment]
c.72.1
:521 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   191->297 1rkdA PDBj 3e-11 34.0 %
:RPS:PDB   193->443 2abqA PDBj 6e-21 16.4 %
:RPS:SCOP  191->420 2fv7A1  c.72.1.1 * 2e-24 22.2 %
:HMM:SCOP  191->502 2ajrA1 c.72.1.1 * 1e-50 33.2 %
:RPS:PFM   195->296 PF00294 * PfkB 6e-10 42.4 %
:HMM:PFM   192->484 PF00294 * PfkB 1.8e-30 30.5 282/300  
:BLT:SWISS 193->288 RBSK_BACHD 3e-12 39.6 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57761.1 GT:GENE BAD57761.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(3097171..3098736) GB:FROM 3097171 GB:TO 3098736 GB:DIRECTION - GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD57761.1 LENGTH 521 SQ:AASEQ MAPHDTGTVAVRNILTRLCKRSGLSADRLRTTEIDVAPLLELPVIRRRAHRDRAAPEAVVAPVVRELAARLAPSDRFIVDAALALGLWRAEPPAGVDPDRLYAPDLGERRASLAEYWHTLHAATDADPNPPELTVRSLRTNPERRAFTALAALLDADPGYGEPGYGDHGYDDTDDATARSEAPAAHTAPLGRITVVGDAVIDHIYRTDRLPAEDAPAKGRFAEHLGGKGLNRAVAAARLGFRVQLMAAVGDDPAGRRILRALRREDVGTDLVRIAAGEPTPVAALIVTATGAYGVIGRGDDAVRLSAEDLTTPAALAALTDCDALLLTFEQPTPVLEQVLRLLRAGARTRPRLFVQPTPPLEAPQYLYEFFDRIDYLIGTPGELAQLVGADPAAVGSETEEQVVHRLRALGVDCVCVVEGLHCRVRSAALTLDVPRPAAAHLDESPGAPAAFVAALARRLAGHGWSAAEPADFAWATAAMAATQSFGEIPHAMPAAAQIDRIAGFTTHAAAGAEYLTGGTG GT:EXON 1|1-521:0| BL:SWS:NREP 1 BL:SWS:REP 193->288|RBSK_BACHD|3e-12|39.6|96/294| SEG 54->72|aapeavvapvvrelaarla| SEG 149->157|alaalldad| SEG 165->178|ygdhgyddtddata| SEG 307->328|aedlttpaalaaltdcdalllt| SEG 446->462|pgapaafvaalarrlag| SEG 471->482|adfawataamaa| BL:PDB:NREP 1 BL:PDB:REP 191->297|1rkdA|3e-11|34.0|106/306| RP:PDB:NREP 1 RP:PDB:REP 193->443|2abqA|6e-21|16.4|238/302| RP:PFM:NREP 1 RP:PFM:REP 195->296|PF00294|6e-10|42.4|99/295|PfkB| HM:PFM:NREP 1 HM:PFM:REP 192->484|PF00294|1.8e-30|30.5|282/300|PfkB| RP:SCP:NREP 1 RP:SCP:REP 191->420|2fv7A1|2e-24|22.2|221/308|c.72.1.1| HM:SCP:REP 191->502|2ajrA1|1e-50|33.2|301/0|c.72.1.1|1/1|Ribokinase-like| OP:NHOMO 153 OP:NHOMOORG 149 OP:PATTERN --------111111-1---------------------------------------------------- ---------------11-------------------2--------1-------11--------------1---------1--1-------2----------------------------------------------11---------1-----------------------------------1-------1----------------2111-----111---1---------------------------1----------1----------------------------------------------------------------111-1-1------------1------1--------------------1-----------1-------------------------------------------------1----11111-----------------1------------------------------------------------------------------------1---------1---------------------------------1------------------------------------------------11-----------------------------------------111-11-1111111111-11111-111111111111111111111-1--------------11111111--11111111-111-----------------------------1--1------1----------1----11---1------------111--------1111-1-11---1111----------------------------------------------------------- ---------------11-1---------------------------------------------------11--------------1-----1--------------12----------------------------------------------------------11-------------------11----1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 253 STR:RPRED 48.6 SQ:SECSTR ##############################################################################################################################################################################################ccEEEEcccEEEEEEEcTTccccccccccEEEEEEEcHHHHHHHHHHHTTcccEEEEEEEHHHHHHHHHHHHHHTTcEEccEEEccccEEEEEEEccccEEEccccccccHHHHHHHHHHHTTccTTcEEEEEEEEEccccccTTcTTHHHHHHHHHTTTcEEEEEccHHHHHHHHHHHGGGcccEEcccHHHHHHHHTcccccccHHHHHHHHHHHHHTTccEEEEEcGGGcEEEEETTEEEEccccccccc############################################################################## DISOP:02AL 1-4, 144-145, 152-188, 520-521| PSIPRED ccccccHHHHHHHHHHHHHHHccccHHHEEEccccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHcccccccccccEEccccccccccccccccccHHcccccccccccccccccccccccccccccccccccccEEEEEHHHHHHHHHcccccccccccccccEEEcccccHHHHHHHHHHccccEEEEEEccccHHHHHHHHHHHHccccEEEEEEEccccccEEEEEEcccccEEEEEEccccccccHHHHccHHHHHHHHcccEEEEEEcccHHHHHHHHHHHHHHHHcccEEEEEcccHHHHHHHHHHHHccccEEEEcHHHHHHHHccccccccHHHHHHHHHHHHHccccEEEEEEcccEEEEEcccEEEEccccEEEcccccccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHcccccccccEEccccc //