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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57765.1
DDBJ      :             putative lipoprotein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  35/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
b.68.6b.68.9
:347 amino acids
:PSIPRED
:DISOPRED
:RPS:SCOP  126->338 1rwiA  b.68.9.1 * 2e-07 26.5 %
:HMM:SCOP  126->340 1v04A_ b.68.6.2 * 9.8e-19 25.5 %
:HMM:PFM   153->193 PF11681 * DUF3277 8.8e-05 39.0 41/146  
:HMM:PFM   242->317 PF10282 * Muc_lac_enz 0.00019 23.7 76/345  
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57765.1 GT:GENE BAD57765.1 GT:PRODUCT putative lipoprotein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(3100858..3101901) GB:FROM 3100858 GB:TO 3101901 GB:DIRECTION - GB:PRODUCT putative lipoprotein GB:PROTEIN_ID BAD57765.1 LENGTH 347 SQ:AASEQ MRPGGTMSATLVGAVALLVLSGCSAEDPDSKVPTREPATAAPAPATTVPAEGTVFGPADPVRALLAESGTGRLAVLASSGEAATTLLLIDPAGAGDVPAVPAQTVTLPAAGVALAQGAPGEVLIPMRDRVVRVDATTGAQSEIPVPGELRSVARADDGTLVVGAADGEVSTIAADGRVEHSLDGLVSADVVVRAGERLAVLDRRQSSVTEISPGADHLGLALRAGEGAATMIADHFGRVLVTDTADGELLVYTTGPLVLRQRFPVGSSPYALAYDRRSETVWVTCTQSNEVVGFDLSTGIPQEVGRYPTVRQPNTVTVDDRTGDLYVGSAAGEGLQRIPADRLKRGQ GT:EXON 1|1-347:0| SEG 9->20|atlvgavallvl| SEG 32->54|vptrepataapapattvpaegtv| SEG 90->102|dpagagdvpavpa| SEG 218->229|lglalragegaa| HM:PFM:NREP 2 HM:PFM:REP 153->193|PF11681|8.8e-05|39.0|41/146|DUF3277| HM:PFM:REP 242->317|PF10282|0.00019|23.7|76/345|Muc_lac_enz| RP:SCP:NREP 1 RP:SCP:REP 126->338|1rwiA|2e-07|26.5|204/256|b.68.9.1| HM:SCP:REP 126->340|1v04A_|9.8e-19|25.5|208/0|b.68.6.2|1/1|Calcium-dependent phosphotriesterase| OP:NHOMO 40 OP:NHOMOORG 35 OP:PATTERN -------------------------------------------------------------------- -----11111121211111-11--1111111112221111------------------------111-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-5, 31-40, 345-347| PSIPRED ccccccHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccEEEcccccHHHHHcccccccEEEEccccccccEEEEEEcccccccccccccEEEcccccEEEEcccccEEEEccccEEEEEEcccccccEEEcccccEEEEEEEccEEEEEcccccEEEEEEccccccccccEEEccEEcccccEEEEEccccccEEEEEccccccccEEEEccEEEEEEEccccEEEEEEccccEEEEEEcccEEEEEEEcccccccEEEEcccccEEEEEEEcccEEEEEEEEcccEEEEEEEccccccEEEEEEccccEEEEEEccccEEEEEEHHHHcccc //