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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57770.1
DDBJ      :             putative transcriptional regulator
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  60/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.4.1
:187 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   14->185 2rekB PDBj 5e-15 39.2 %
:RPS:PDB   16->177 3cjdB PDBj 9e-09 17.5 %
:RPS:SCOP  14->80 2o7tA1  a.4.1.9 * 2e-12 25.4 %
:HMM:SCOP  2->89 1t33A1 a.4.1.9 * 1.8e-13 34.1 %
:HMM:PFM   18->63 PF00440 * TetR_N 4.1e-13 39.1 46/47  
:HMM:PFM   131->168 PF00676 * E1_dh 0.00065 23.7 38/300  
:BLT:SWISS 14->81 Y097_STAAR 3e-05 34.3 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57770.1 GT:GENE BAD57770.1 GT:PRODUCT putative transcriptional regulator GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(3105545..3106108) GB:FROM 3105545 GB:TO 3106108 GB:DIRECTION - GB:PRODUCT putative transcriptional regulator GB:PROTEIN_ID BAD57770.1 LENGTH 187 SQ:AASEQ MDRIRRPRADARRNYERLLTEADAVFRAEGAHASLEKIARRAGVAIGTLYGHFPTRRALVGALLRERNTALFATAEDLLADPDPGAALTRWVHAVIEHAAAYQGLAALLADGLGDEGSELHESCARMNALGEAILARARTVGAVRADVTADDLFALMNTAAWAREHLPRPGADRLVALTLTGMRADP GT:EXON 1|1-187:0| BL:SWS:NREP 1 BL:SWS:REP 14->81|Y097_STAAR|3e-05|34.3|67/191| SEG 2->13|drirrpradarr| SEG 99->117|aaayqglaalladglgdeg| BL:PDB:NREP 1 BL:PDB:REP 14->185|2rekB|5e-15|39.2|166/175| RP:PDB:NREP 1 RP:PDB:REP 16->177|3cjdB|9e-09|17.5|160/177| HM:PFM:NREP 2 HM:PFM:REP 18->63|PF00440|4.1e-13|39.1|46/47|TetR_N| HM:PFM:REP 131->168|PF00676|0.00065|23.7|38/300|E1_dh| RP:SCP:NREP 1 RP:SCP:REP 14->80|2o7tA1|2e-12|25.4|67/78|a.4.1.9| HM:SCP:REP 2->89|1t33A1|1.8e-13|34.1|88/0|a.4.1.9|1/1|Homeodomain-like| OP:NHOMO 118 OP:NHOMOORG 60 OP:PATTERN -------------------------------------------------------------------- 111-B---------2-1----111-4------22121-1--61821--1-----------222-9--454--------------------------------------------------------------------------1------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1--4--------11111-----------------------------1--1111---12--------------------------122-------------------------------------------------1------------------1--------1------------------------------------------------------------11--------------------------------------------------------------------------------------------------------------121------------------------------------------------------------1-----------------------------------------------------------------------1111------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 174 STR:RPRED 93.0 SQ:SECSTR #############HHHHHHHHHHHHHHHHcGGGcHHHHHHHHTccHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHcTTccHHHHHHHHHHHHHHHHHHHHHHTTcTTcccGGGHHHHHHHHHcT DISOP:02AL 1-17| PSIPRED cccccccccHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHccccccHHcccccHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHccc //