[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57776.1
DDBJ      :             putative oxidoreductase
Swiss-Prot:             

Homologs  Archaea  25/68 : Bacteria  553/915 : Eukaryota  149/199 : Viruses  0/175   --->[See Alignment]
c.1.7
:320 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   1->315 1lqaA PDBj 3e-24 30.9 %
:RPS:PDB   1->318 3eauA PDBj 3e-48 24.8 %
:RPS:SCOP  2->319 1pz1A  c.1.7.1 * 2e-48 26.4 %
:HMM:SCOP  1->318 1pz1A_ c.1.7.1 * 1.2e-69 39.1 %
:RPS:PFM   16->313 PF00248 * Aldo_ket_red 2e-32 39.4 %
:HMM:PFM   17->315 PF00248 * Aldo_ket_red 1.1e-52 32.8 274/284  
:BLT:SWISS 1->309 YAJO_ECOLI 3e-27 31.3 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57776.1 GT:GENE BAD57776.1 GT:PRODUCT putative oxidoreductase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(3110876..3111838) GB:FROM 3110876 GB:TO 3111838 GB:DIRECTION - GB:PRODUCT putative oxidoreductase GB:PROTEIN_ID BAD57776.1 LENGTH 320 SQ:AASEQ MEQRTVGRSGLRVSRIGLATHTWGAQTDADDAAVQLSAFAEAGGTLVDTSPSYTGGAAQRILADLLGDLVSREDLVLSGCAGVQPGVTPAATDLPSAPRPWVDASRRGLLRQLDRTLLELGTDHLDIWHVAAWDPRTPLEEVADTLEQAVRAGKTRYVGVRGFSAWQLASLAAIAPIVTAHTPYSLLARGAETDFVPAAAHHGVGVIASAPLAGGILTGKYRDGVPADSRGADEATAAEIRRRLDERATRVVDAVVTAADGLGTSPLAVALAWIRDRPGVASMIVGARDIGQLTGVLAAETLELPRAIAAALDDVSARTD GT:EXON 1|1-320:0| BL:SWS:NREP 1 BL:SWS:REP 1->309|YAJO_ECOLI|3e-27|31.3|294/324| SEG 106->120|rrgllrqldrtllel| SEG 247->260|ratrvvdavvtaad| BL:PDB:NREP 1 BL:PDB:REP 1->315|1lqaA|3e-24|30.9|307/346| RP:PDB:NREP 1 RP:PDB:REP 1->318|3eauA|3e-48|24.8|307/327| RP:PFM:NREP 1 RP:PFM:REP 16->313|PF00248|2e-32|39.4|269/281|Aldo_ket_red| HM:PFM:NREP 1 HM:PFM:REP 17->315|PF00248|1.1e-52|32.8|274/284|Aldo_ket_red| GO:PFM:NREP 2 GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF00248|IPR001395| GO:PFM GO:0055114|"GO:oxidation reduction"|PF00248|IPR001395| RP:SCP:NREP 1 RP:SCP:REP 2->319|1pz1A|2e-48|26.4|307/333|c.1.7.1| HM:SCP:REP 1->318|1pz1A_|1.2e-69|39.1|307/0|c.1.7.1|1/1|NAD(P)-linked oxidoreductase| OP:NHOMO 2617 OP:NHOMOORG 727 OP:PATTERN --------2222112-16111-1-3224-541----------------------------12222--- 45B3K-13333-1-14411-1---19111111-33326757C5KBA414B928CD219--7743F2DDCC41222122---14--11-4511-3-------5131F-323--------------11-1111--12112222---9-2-131132211------1-1652B1------------6531112-613111111111111121313335112122-1--1222212E---------------1---1--612211---3222231-414311--------------------------------------------11---1------------------2-1--2-1--------1----1-1---2-27222-----A6654--134112----------4-344349337A1-H998BC7IGD985415-31621223331111111156631132------------------------------134222433598878A6444366A8444424C6F1323--11262322432751141-2111-----------12211---1----1----2111-131146559D-21-1-----------------1--1111116-32--4111111111-111211111------111------4335-754445455544-434454345445644444499744---3254534334543445733332431-644444444444----------111-1252---3-2-------1-22212231118155352435232342555111-12--11-111111111111134654553333111---1111111----------1----1-------------1------1121123121162 --------21--112844569B59A9A22-1112112212122111547979CA58445434--1-1---23---211222-----12-ISD48P83244322966-15DC6233422-1-62242191BK6-457-1--212411----6--414223---163-----2--1-1233D12337A6B825A11D4D66 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 320 STR:RPRED 100.0 SQ:SECSTR ccEEEcTTcccEEEcEEEEcTcccccccHHHHHHHHHHHHHTTccEEEEETTGGGGHHHHHHHHHHHHHccGGGcEEEEEEccccccGGGccccHHHHHHHHHHHHHHHTEEEEccccccTcccEEEEEEccccTTccHHHHHHHHHHHHHTTcEEEEEEEcccHHHHHHHHHHHcccEEEEEccTTccHHHHHHHHHHHHHccEEEEEcTTGGGGGGTTTTTcccTTcGTTcHHHHHHHHcHHHHHHHHHHHHHHHHHHHHTccHHHHHHHHHHccTTccEEEEccccHHHHHHHHGGGGGGccHHHHHHHHHHHcccc DISOP:02AL 319-320| PSIPRED ccEEcccccccEEccEEEEEccccccccHHHHHHHHHHHHHccccEEEcHHHcccccHHHHHHHHHHccccccEEEEEEEEccccccccccccccccccccccccHHHHHHHHHHHHHHccccEEEEEEEEcccccccHHHHHHHHHHHHHHccEEEEEEEcccHHHHHHHHHcccEEEEEcccccccccHHHHHHHHHHHcccEEEEEccccccccccccccccccccccccccccHHHHHcccHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHcccEEEEEEccccHHHHHHHHHHccccccHHHHHHHHHHHHccc //