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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57784.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  9/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
e.3.1
:281 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   12->140 2qmiC PDBj 7e-08 35.2 %
:RPS:PDB   18->227 2dd0F PDBj 2e-16 18.4 %
:RPS:SCOP  18->227 1ei5A3  e.3.1.1 * 1e-19 15.2 %
:HMM:SCOP  18->280 1hvbA_ e.3.1.1 * 2.9e-23 24.5 %
:RPS:PFM   4->140 PF00144 * Beta-lactamase 5e-07 39.0 %
:RPS:PFM   158->226 PF05954 * Phage_GPD 6e-07 36.2 %
:HMM:PFM   18->248 PF00144 * Beta-lactamase 8.2e-24 26.9 219/329  
:BLT:SWISS 18->186 DAP_BRUO2 7e-05 28.6 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57784.1 GT:GENE BAD57784.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 3118325..3119170 GB:FROM 3118325 GB:TO 3119170 GB:DIRECTION + GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD57784.1 LENGTH 281 SQ:AASEQ MLDPVSPDAWCLHSAAVTVTPVYSIAKIFTAAAALRCLDPEREIGAVAPVPARLAGLRVGDLLTHRSGLGDYGAWPEYRRAVAERGDAWPEEVILERVELARPGVFRYSNPGYLLVRRALEEQHGDRFFPVLRRLVLDPLELPAHPFASRADWAHCTVEIPAGVRAYDPRWVYPGTFCADVTDTAAALARLLSGTLGAELPTAMCRTHPVDAPGHPLSDPGYGAGLMTSGNPPAIVGHGGGGPGFTLFAAARVDGSAAHGTVEARECDDAPLIRRCLAALR GT:EXON 1|1-281:0| BL:SWS:NREP 1 BL:SWS:REP 18->186|DAP_BRUO2|7e-05|28.6|168/100| SEG 230->244|gnppaivghggggpg| BL:PDB:NREP 1 BL:PDB:REP 12->140|2qmiC|7e-08|35.2|125/446| RP:PDB:NREP 1 RP:PDB:REP 18->227|2dd0F|2e-16|18.4|206/333| RP:PFM:NREP 2 RP:PFM:REP 4->140|PF00144|5e-07|39.0|123/324|Beta-lactamase| RP:PFM:REP 158->226|PF05954|6e-07|36.2|69/285|Phage_GPD| HM:PFM:NREP 1 HM:PFM:REP 18->248|PF00144|8.2e-24|26.9|219/329|Beta-lactamase| RP:SCP:NREP 1 RP:SCP:REP 18->227|1ei5A3|1e-19|15.2|210/333|e.3.1.1| HM:SCP:REP 18->280|1hvbA_|2.9e-23|24.5|257/346|e.3.1.1|1/1|beta-lactamase/transpeptidase-like| OP:NHOMO 9 OP:NHOMOORG 9 OP:PATTERN -------------------------------------------------------------------- ------------------------------------1-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1------1-----------------------------------------------------------------------------------------------------------------------------------------------1-----------------------------------------------------------------------------------1----------------------------------------------------------------------------------------------------------------------------------1-1------1-1------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 226 STR:RPRED 80.4 SQ:SECSTR ###EccTTcccccccTTccEEcGGGGHHHHHHHHHHHccTTccGGGTcTTcTTGGGccGGGGTTTccccccccTTccccccccccHHHHHHHHHHHcccccTTcccccccHHHHHHHHHHHHHHTccHHHHHHHTTTGGGTcTTcEETTcGGGccccccccccTTcccGGGTGGGGTcTcEEEcHHHHHHHHHccccHHHHHHHHTccEEEcccccccEEEEccccEEE#################################################### DISOP:02AL 1-4| PSIPRED cccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHcccccHHHHHHHHcccccccccHHHHHHHHccccccHHHHHHHccccccccccccccHHHHHHHHHHHHHccccHHHHHHHHHHccccccccccccccccccccEEcccccccccccccccccccccHHHHHHHHHHHHHHHcccHHHHHHHHHHHcccccccccccccEEEEEEEccccEEEEEccccccEEEEEEEEEccccEEEEEEEEEccccHHHHHHHHHHc //