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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57791.1
DDBJ      :             putative transcriptional regulator
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  3/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.4.1
:212 amino acids
:PSIPRED
:DISOPRED
:HMM:SCOP  1->73 2fd5A1 a.4.1.9 * 1.7e-12 35.6 %
:HMM:PFM   13->56 PF00440 * TetR_N 3.3e-13 52.3 44/47  
:HMM:PFM   135->200 PF11981 * DUF3482 0.00014 18.2 66/292  
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57791.1 GT:GENE BAD57791.1 GT:PRODUCT putative transcriptional regulator GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(3124574..3125212) GB:FROM 3124574 GB:TO 3125212 GB:DIRECTION - GB:PRODUCT putative transcriptional regulator GB:PROTEIN_ID BAD57791.1 LENGTH 212 SQ:AASEQ MPRPRVHDPDTVLDAAEALAVRAGRAAVTVRAVAAATGVSNGALYHTFGSRGALLARAWVRAARRFLDVQRALAFPETAEPHSDSDAEAAVTAAIVAAAEAPSVFAERFPDSARLVLTVSREQLLDADLPAELAAELRGAERDLVAVLVDLAQRRWGRRDRRAVQVLTTCLVDLPTAILLRRDQLADPHARHQLRAAVRAVLDIGPPERKSP GT:EXON 1|1-212:0| SEG 12->39|vldaaealavragraavtvravaaatgv| SEG 51->67|rgallarawvraarrfl| SEG 87->107|aeaavtaaivaaaeapsvfae| SEG 124->144|lldadlpaelaaelrgaerdl| SEG 154->162|rrwgrrdrr| HM:PFM:NREP 2 HM:PFM:REP 13->56|PF00440|3.3e-13|52.3|44/47|TetR_N| HM:PFM:REP 135->200|PF11981|0.00014|18.2|66/292|DUF3482| HM:SCP:REP 1->73|2fd5A1|1.7e-12|35.6|73/0|a.4.1.9|1/1|Homeodomain-like| OP:NHOMO 3 OP:NHOMOORG 3 OP:PATTERN -------------------------------------------------------------------- ----------------------11------------1-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-6, 208-212| PSIPRED ccccccccHHHHHHHHHHHHHHcccccccHHHHHHHHcccccHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHccccccccc //