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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57793.1
DDBJ      :             putative oxidoreductase
Swiss-Prot:             

Homologs  Archaea  51/68 : Bacteria  571/915 : Eukaryota  15/199 : Viruses  0/175   --->[See Alignment]
b.52.2c.81.1
:742 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   10->482 1fdiA PDBj 2e-45 32.7 %
:RPS:PDB   6->715 1dmsA PDBj 7e-94 21.0 %
:RPS:SCOP  10->565 1aa6A2  c.81.1.1 * 8e-82 25.8 %
:RPS:SCOP  596->715 1ti2A1  b.52.2.2 * 8e-20 19.3 %
:HMM:SCOP  2->638 1kqfA2 c.81.1.1 * 5.9e-130 32.2 %
:HMM:SCOP  589->726 1ti6A1 b.52.2.2 * 1.4e-39 38.7 %
:RPS:PFM   3->51 PF04879 * Molybdop_Fe4S4 3e-07 34.7 %
:RPS:PFM   60->478 PF00384 * Molybdopterin 3e-47 35.5 %
:RPS:PFM   624->704 PF01568 * Molydop_binding 1e-10 49.3 %
:HMM:PFM   60->479 PF00384 * Molybdopterin 7.8e-47 25.7 405/432  
:HMM:PFM   592->711 PF01568 * Molydop_binding 1.2e-27 34.3 108/109  
:HMM:PFM   8->52 PF04879 * Molybdop_Fe4S4 6.9e-12 31.1 45/55  
:BLT:SWISS 10->482 FDHF_ECOLI 3e-46 32.6 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57793.1 GT:GENE BAD57793.1 GT:PRODUCT putative oxidoreductase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(3125949..3128177) GB:FROM 3125949 GB:TO 3128177 GB:DIRECTION - GB:PRODUCT putative oxidoreductase GB:PROTEIN_ID BAD57793.1 LENGTH 742 SQ:AASEQ MSATTIARQCTLCEAHCGILVTVEDAKVTRIEGNPEDVLSKGYICPKATAMGGLHHDPDRLRTPVRRVGDRFEPIGWDEAFAEIGRRLRAVRAAHGPSAIGMYLGNPAAHSSSVIYGVLLRTALLTRNFFTASSIDQFPQEFAAWQMFGSNLLMPVADIDRTDRLVILGANPAVSNGSVTTMPGAKLRIREVRKRGGSVVVVDPRRTETARLADEHVAVAPGGDVYLLLAMLHVLVAEGLCDERAVRDRCAGWDELRALVAEVTPEAMAPYAGVDAATIRRLAREHAAASSAVMYARIGVCQQVTGTLTHWLVNTINAVTGNLDSPGGQMFTTPPVDALRFARLSRVGYGAWTDSTGMFKSFRGELPVAVLAEEIRTDSPQRIRAMITYAGNPVLSTPQRGRLGAALDSLEFYVAVDMYVTETTRHADIILPPISQLEREDLNFLFPVFSVRNNVRFDARVFEPPADGLEDWQILARLVTELVPLPARRFTGRLLNALFEVASPLRLTALGMAVGPHGVLRRGRKGVTVAKLRRTPGGVDLGPLQPRLRSIIATKDRKVQLAPADFVSAAAELVAEARAGRALTAPADGFDLKLIGRRHLRSNNSWLHNLPSMVKGKDRCTALMHPRDAQARGLVDGEQVEVTSSTGSIVVTLEVSDEIRPGAVAVPHGWGHREPGVGWSVAASLPGANVNLLPDPALTDRFSGNSAVNNTWVRVARAAGEPDRAAADMVSDSAVVSDPATV GT:EXON 1|1-742:0| BL:SWS:NREP 1 BL:SWS:REP 10->482|FDHF_ECOLI|3e-46|32.6|442/715| SEG 569->583|aaaelvaearagral| SEG 716->740|araagepdraaadmvsdsavvsdpa| BL:PDB:NREP 1 BL:PDB:REP 10->482|1fdiA|2e-45|32.7|441/714| RP:PDB:NREP 1 RP:PDB:REP 6->715|1dmsA|7e-94|21.0|682/766| RP:PFM:NREP 3 RP:PFM:REP 3->51|PF04879|3e-07|34.7|49/55|Molybdop_Fe4S4| RP:PFM:REP 60->478|PF00384|3e-47|35.5|394/423|Molybdopterin| RP:PFM:REP 624->704|PF01568|1e-10|49.3|71/112|Molydop_binding| HM:PFM:NREP 3 HM:PFM:REP 60->479|PF00384|7.8e-47|25.7|405/432|Molybdopterin| HM:PFM:REP 592->711|PF01568|1.2e-27|34.3|108/109|Molydop_binding| HM:PFM:REP 8->52|PF04879|6.9e-12|31.1|45/55|Molybdop_Fe4S4| GO:PFM:NREP 4 GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF04879|IPR006963| GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF00384|IPR006656| GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF01568|IPR006657| GO:PFM GO:0030151|"GO:molybdenum ion binding"|PF01568|IPR006657| RP:SCP:NREP 2 RP:SCP:REP 10->565|1aa6A2|8e-82|25.8|524/564|c.81.1.1| RP:SCP:REP 596->715|1ti2A1|8e-20|19.3|119/147|b.52.2.2| HM:SCP:REP 2->638|1kqfA2|5.9e-130|32.2|606/817|c.81.1.1|1/1|Formate dehydrogenase/DMSO reductase, domains 1-3| HM:SCP:REP 589->726|1ti6A1|1.4e-39|38.7|137/0|b.52.2.2|1/1|ADC-like| OP:NHOMO 2443 OP:NHOMOORG 637 OP:PATTERN ---1--31323333323-1212135--13-341-21-122221121453--1-132233421221--- 21323--1111--143322-29--4722222276763378131421--1---2241----1151213353---------5OF23-3-4-------------1---111-------------------2221-121213333---422111111111111121111121111------------33132---3-52222222212222222244152211321--1111111211111111111111111--111---------------------------------------------------------------------134-1----------12---222----18--22da2245-457---1---2213221-----267552-31A16211111111111-5575575753--644533433455752-1535362253611111111511-3613-----------------------------11332-343246557554555566476676467457866-377556344524665543244334----------953-BBA4495343338-4548514235535153B345221111-2-2-------39234335312234-2-26588729A9886679A6C9----731------A753581BCCBB8589B-9BBAA9AABBAAB8BBBB777844118A9A79ABAAA9ADA8A67668777--343444444444-------------424323347332222112222222211-221145344342433333222---------12558344446635511-2122---------4-22------------------------------------------1-------22- ------------------1111-1-1----------1----------------1-111----------------------------------------------------------------------------------------------------1----2------------------------3-----1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 715 STR:RPRED 96.4 SQ:SECSTR TTcEEcccEEEEEEETTEEEEEEETTEEEEEEEcTTccccTccccTTHHHHHHHHHcTTcccccEEEHHccEEEccHHHHHHHHHHHHHHHHHHHcGGGEEcccccccccccccHHHHHHHccEEEcccccTTHHHHHHHHTccccTTccccTcHHHHHHHccEEEEEcccHHHHTTccccccccTHHHHHHHHHTcEEEEEcccccHHHHHTcEEEcccTTcHHHHHHHHHHHHHHTTcccHHHHHHHEEcHHHHHHHHccccHHHHHHHHcccHHHHHHHHHHHHHccEEEEEcccGGGccTTTHHHHHHHHHHHHHHTcTTcTTcEEEcccccccccccccccccccccEEEGGGHHHHHHHcTTcEEEETTEEEEcccccEEEEEcccHHHHcccHHHHHHHGGGccEEEEEEccccHHHHTccEEEEcccGGGccEEEEEEEcTTTccEEEEEcccccccTTcccHHHHHHHHHHHHHHHHHHHHHHTTccccHHHHHHHcEEEcccccGGGccTHHHHHcTTTcccccccccEEcccHHHHHHTcTTcccccccccccccTTHTcTTccccccccccccTTccccEEEEccccccccTTcTTTGGGGTccTTccEEEEcHHHHHHTTccTTcEEEEEccccEEEEEEEEcTTccTTEEEccTTcccccccTTccTTcccccccGGGccccccccTTTccccTTccEEEE########################### PSIPRED cccEEEEEEcccccccccEEEEEEccEEEEEEcccccccccccccHHHHHHHHHHcccccccccEEEccccEEEccHHHHHHHHHHHHHHHHHHccccEEEEEEcccccHHHHHHHHHHHHHHcccccEEcccccccHHHHHHHHHHccccccccHHHHHcccEEEEEcccHHHHcccccccHHHHHHHHHHHHcccEEEEEEccccHHHHHHccEEEEccccHHHHHHHHHHHHHHcccccHHHHHHHcccHHHHHHHHccccHHHHHHHHcccHHHHHHHHHHHHccccEEEEEcHHHHHHHcHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccHHHHHHHHHcccccHHHHHHHHHccccccEEEEEEEcccHHHHcccHHHHHHHHccccEEEEEccccccHHHcccEEEccccccccccccccccEEEcccEEEEEccccccccccccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEccccccEEccEEcccHHHHHcccccEEEEcHHHHHHcccccccEEEEEEcccEEEEEEEEcccccccEEEEcccccccccccccccccccccccccccccccccccccccccccEEEEEEEEccccHHHHHHHHHccccHHcccccc //