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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57794.1
DDBJ      :             putative transcriptional regulator
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  264/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
d.110.2
:423 amino acids
:PSIPRED
:DISOPRED
:RPS:SCOP  99->217 1mkmA2  d.110.2.2 * 9e-06 15.3 %
:HMM:PFM   135->187 PF08448 * PAS_4 0.00021 19.2 52/110  
:BLT:SWISS 6->215 YTH3_RHOER 3e-35 37.6 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57794.1 GT:GENE BAD57794.1 GT:PRODUCT putative transcriptional regulator GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(3128261..3129532) GB:FROM 3128261 GB:TO 3129532 GB:DIRECTION - GB:PRODUCT putative transcriptional regulator GB:PROTEIN_ID BAD57794.1 LENGTH 423 SQ:AASEQ MGEFSAITPGTDLPRYARDLVRMHDAVIGGGRSPMRPRTVVARSWSRVLAAGLVPDRPNERMVLPLSEVERRRRESPLGAVIGEVTQLIEGIADAAQMLMVVSDADGVVLWRAGSTKVRHRADGLGFQEGARWTEPAVGTNAIGTALAEAEPVQLVAGEHFEQSQHPWYCTAAPVHDPRTGELIGVVDVSGPALTLHPTITALIGAAVRLAEGQLARYQQERLERLRTASMPALSAVRGPALLVDEHGWVAHAVGVAAGRRIAVPDAVRAVHVPGLGLCEAEPLNSGWLVRPRSADDRIRLTLDLSGAPVLVARGESDWRRTLSTRHAEILLLLDRCGAAGMTVAALSVALYGDPDHAVAVRAELSRLRRVVGSVVESRPYRLAPAVELTVSCGGLDVAESAFVRESSSPGVRALANQPDARR GT:EXON 1|1-423:0| BL:SWS:NREP 1 BL:SWS:REP 6->215|YTH3_RHOER|3e-35|37.6|210/437| SEG 250->264|vahavgvaagrriav| SEG 364->379|elsrlrrvvgsvvesr| HM:PFM:NREP 1 HM:PFM:REP 135->187|PF08448|0.00021|19.2|52/110|PAS_4| RP:SCP:NREP 1 RP:SCP:REP 99->217|1mkmA2|9e-06|15.3|118/171|d.110.2.2| OP:NHOMO 448 OP:NHOMOORG 264 OP:PATTERN -------------------------------------------------------------------- ----1---------1------2--15-----1311145A4--3-1-------112-1---112-113222------------------------------------------------------------------1211---------------------------11------------------------111111111-111111111111111-11----------2--------------------------------------------------------------------------------------------1--24335445333--332-------------32--11--1-312----1-----------42233---12---11111111-11-1-1--1---1--122211111122241--2-32122-11--------3--1---1------------------------------------111-2222221----22151111-11232332--12138111243243----3111-----------242--1-11---1------1----2221-1112---------------------------1-21---------111111--111111--11-----2---------1----1------------------------------111---------------------2---------1---1----111-----------------2---------------2222212---3-1111222213334-111-------------21111112111--11111---------------------------------------------------------------1-- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-2, 421-423| PSIPRED ccccccccccccccHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHcccccccccccEEccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEccccEEEEEcccHHHHHHHHHcccccccccccccccccHHHHHHHccccEEEEccHHHHHHHcccEEEEEEEEEccccEEEEEEEEccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEcccccEEEEcHHHHHHHHcccHHHcccccccccHHHHHccccccccccccccccEEEEEccccccEEEccccccccccccHHHHHHHHHHHccccccccHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHccccccccHHHHccEEEEEEEEcccccccccccHHHHHHHHHHcccc //