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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57795.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  178/915 : Eukaryota  126/199 : Viruses  0/175   --->[See Alignment]
c.3.1c.4.1d.17.4
:608 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   268->371 1w4xA PDBj 3e-12 30.7 %
:RPS:PDB   6->150 3b4oB PDBj 5e-11 9.1 %
:RPS:PDB   201->382 2a87A PDBj 4e-14 15.8 %
:RPS:PDB   420->514 2ea9A PDBj 2e-15 19.4 %
:RPS:SCOP  9->124 1m98A2  d.17.4.6 * 7e-08 12.6 %
:RPS:SCOP  193->332 1i8tA1  c.4.1.3 * 7e-05 5.1 %
:RPS:SCOP  310->514 1w4xA2  c.3.1.5 * 8e-17 18.6 %
:HMM:SCOP  15->127 1oh0A_ d.17.4.3 * 4.9e-08 23.9 %
:HMM:SCOP  172->377 1w4xA1 c.3.1.5 * 7.8e-43 30.7 %
:HMM:SCOP  309->511 2gvcA2 c.3.1.5 * 3.2e-26 39.0 %
:RPS:PFM   187->376 PF00743 * FMO-like 2e-27 40.3 %
:HMM:PFM   231->376 PF00743 * FMO-like 6.9e-20 27.4 146/532  
:HMM:PFM   478->515 PF00743 * FMO-like 1.4e-05 51.4 37/532  
:HMM:PFM   177->209 PF01494 * FAD_binding_3 4.9e-06 36.4 33/356  
:HMM:PFM   337->430 PF00148 * Oxidored_nitro 0.00011 23.4 94/398  
:BLT:SWISS 197->514 FMO5_RAT 1e-18 27.3 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57795.1 GT:GENE BAD57795.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 3129684..3131510 GB:FROM 3129684 GB:TO 3131510 GB:DIRECTION + GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD57795.1 LENGTH 608 SQ:AASEQ MTRTLEPSAAPEEALDPQTRVETWLREFETALAARDIEAAAGMFAVDSFWRDLIAFTWNIKTVEGRDGVTDMLRARLDDTDPRGFHTTEPVTEADGVITAWIGFETAVGRAAGHLRLTDGGAWTLLTSLRELKGHEENKGPRRPKGVEHGATRERVTWSEQREQEERELGVTRQPYVVVVGGGQGGIALGARLRQLGVPALVVDKHDRPGDQWRKRYKSLCLHDPVWYDHLPYLPFPDNWPVFTPKDKIGDWLEMYTKIMEVPYWSKTVCRSATYDEQTGEWTVHVERDGEPLVLRPKHLVLATGMSGKPNIPNFPGMDRFQGDQHHSSQHPGPDAYAGKRAVIIGSNNSAHDICGALWEAGADVTMVQRSSTHIVKSDSLMELGLGDLYSERALAAGMTTDKADLTFASMPYRIMHQFQIPIYDAIRERDADFYARLERAGFQLDWGDDGSGLFMKYLRRGSGYYIDVGASELVANGDIKLAHGQVRELTEHSVILEDGTELPADLVVYATGYGSMNGWAADLIGQDVADKVGKCWGYGSGTTKDPGPFEGELRNMWKPTQQDGLWFHGGNLHQSRHYSLYLALQLKARYENIPTPVYGLQEVYHLS GT:EXON 1|1-608:0| BL:SWS:NREP 1 BL:SWS:REP 197->514|FMO5_RAT|1e-18|27.3|289/533| SEG 177->186|vvvvgggqgg| BL:PDB:NREP 1 BL:PDB:REP 268->371|1w4xA|3e-12|30.7|101/533| RP:PDB:NREP 3 RP:PDB:REP 6->150|3b4oB|5e-11|9.1|143/158| RP:PDB:REP 201->382|2a87A|4e-14|15.8|158/313| RP:PDB:REP 420->514|2ea9A|2e-15|19.4|93/103| RP:PFM:NREP 1 RP:PFM:REP 187->376|PF00743|2e-27|40.3|186/247|FMO-like| HM:PFM:NREP 4 HM:PFM:REP 231->376|PF00743|6.9e-20|27.4|146/532|FMO-like| HM:PFM:REP 478->515|PF00743|1.4e-05|51.4|37/532|FMO-like| HM:PFM:REP 177->209|PF01494|4.9e-06|36.4|33/356|FAD_binding_3| HM:PFM:REP 337->430|PF00148|0.00011|23.4|94/398|Oxidored_nitro| GO:PFM:NREP 4 GO:PFM GO:0004499|"GO:flavin-containing monooxygenase activity"|PF00743|IPR000960| GO:PFM GO:0050660|"GO:FAD binding"|PF00743|IPR000960| GO:PFM GO:0050661|"GO:NADP or NADPH binding"|PF00743|IPR000960| GO:PFM GO:0055114|"GO:oxidation reduction"|PF00743|IPR000960| RP:SCP:NREP 3 RP:SCP:REP 9->124|1m98A2|7e-08|12.6|111/142|d.17.4.6| RP:SCP:REP 193->332|1i8tA1|7e-05|5.1|136/298|c.4.1.3| RP:SCP:REP 310->514|1w4xA2|8e-17|18.6|204/235|c.3.1.5| HM:SCP:REP 15->127|1oh0A_|4.9e-08|23.9|109/0|d.17.4.3|1/1|NTF2-like| HM:SCP:REP 172->377|1w4xA1|7.8e-43|30.7|202/0|c.3.1.5|1/2|FAD/NAD(P)-binding domain| HM:SCP:REP 309->511|2gvcA2|3.2e-26|39.0|105/0|c.3.1.5|2/2|FAD/NAD(P)-binding domain| OP:NHOMO 829 OP:NHOMOORG 304 OP:PATTERN -------------------------------------------------------------------- --1--1-22221-2344----6--45-----1786855B7-1-1-1------112-1---111-2114312-------------------------------------1-------------------------------1---1----1----------------1------------------1--------111111-1111111111----11111-----------1------------------------------------------------------------------------------------------------------------------------------------------------111--------21----11-12-------------11-1--2241-2112--1---11---1111111112-2111111112-------------------------------------121---1-1-11222111111441-1111-12221-12--11-22---111-11----------------11---------------------------------1------------------------------1--------1------1-------------------------------------------------------------1-1---1------------------------------------------------------1--3---------------1---1-1--1------1113-21111---------------------------21----------------11----------------------------------------------------- ------------11133327573666722233311221111111111147459A23213222--211-------1--------------CI63521234-11-----15-81-1-1A2134192A8653FR6-A6764248448544352833D41-57121-41--------------------695D3C6------1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 601 STR:RPRED 98.8 SQ:SECSTR #####cccHHHHHHHHHHHHHHHHHHHHHHHccGGGGGGGGGGEEEEEEEEEcccTTcccEEEEcHHHHHHHHHHHHHHcTTcEEEEEEEEEcccTTEEEEEEEEEEEEEEEEEEEEEETTEEEEEEEEccHHHHHHHHTccccccccTTccTTccccccccccEEEEEcccEEEEEEccHccHHHHHHHHHHHHHTccEEEEcccccccGGGHHHHHHHHHHHHHHHHHTHccccccccTTcTTcccHHHHHHHHHHHHHHTTcEEEcccEEEEEcccccEEEEEEcETTccEEEEEEEEEcccEcGEEcccccTHHHHTcTTTEEccHHHHGGGGTTcEEEEEcccHHHHHHHHHHTTTccEEEEEcccccccccTTHHHHHHHcTTEEEEccEEccEEEEEEEEccccEEEEEEEEcccHHHHTcccccEEEEEEEEETTEEEccGGGEEEEcccTcTTHHHHHHHHHHHHHHHHHHHHHHcccTTcccEEEEEETTEEEEEEEcTTcccEcccccccccETTccccTTTTcccEETTEETTcTTEEEcHcTTccHHHEEEEEEcTTTcccccTHHHHTTcEEEcccccccccTTccHHHHHH## DISOP:02AL 1-6, 140-170, 605-608| PSIPRED cccccccccccHHcccHHHHHHHHHHHHHHHHHcccHHHHHHHHHccccccccEEEEEcccEEccHHHHHHHHHHHHHHHccccccccccccccccEEEEEEEEEcccccEEEEEEEccccEEEHHHHHHHHHcccHHccccccccHHcccccccccccccccccccccccccccEEEEEcccHHHHHHHHHHHHccccEEEEEccccccccEEEccccEEEEccHHHHccccccccccccccccHHHHHHHHHHHHHHHccEEEEEEEEEEEEEcccccEEEEEEEEcccEEEEEEEEEEEEEcccccccccccccHHHccccEEEEccccccHHccccEEEEEcccHHHHHHHHHHHHcccEEEEEEEccEEEEcccHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccEEccccEEEcccHHHHHcccccEEEcccEEEEccccEEEccccEEEccEEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEcccHHHHHHHHHHHHHHHHHHHccccccccccccccccc //