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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57802.1
DDBJ      :             putative oxidoreductase
Swiss-Prot:             

Homologs  Archaea  25/68 : Bacteria  402/915 : Eukaryota  26/199 : Viruses  0/175   --->[See Alignment]
c.1.7
:290 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   17->273 1pyfA PDBj 1e-14 28.0 %
:RPS:PDB   1->274 3eauA PDBj 2e-33 21.3 %
:RPS:SCOP  17->274 1pyfA  c.1.7.1 * 6e-41 26.6 %
:HMM:SCOP  9->292 1pyfA_ c.1.7.1 * 1.3e-57 35.3 %
:RPS:PFM   24->271 PF00248 * Aldo_ket_red 7e-22 35.3 %
:HMM:PFM   22->289 PF00248 * Aldo_ket_red 7.2e-54 30.9 256/284  
:BLT:SWISS 8->271 YDBC_ECOLI 1e-86 64.8 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57802.1 GT:GENE BAD57802.1 GT:PRODUCT putative oxidoreductase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(3139183..3140055) GB:FROM 3139183 GB:TO 3140055 GB:DIRECTION - GB:PRODUCT putative oxidoreductase GB:PROTEIN_ID BAD57802.1 LENGTH 290 SQ:AASEQ MSTPSLPLPGGTWTLGDLTVTRFGYGAMQLAGPGVMGPPADREGALAVLREAVALGITHIDTSDAYGPRVTNELIRQALHPYPDSLHIVTKVGATRDEQGGWPTARRPDDLRRQVHDNLESLRLDVLDLVNLRLGNAQGPQPGSLAEAFETLVELQQRGLIRHLGISNATEEQVTEAQRIAPIVCVQNMYNLAHRHDDKLIDRLATDGVAYVPFFPLGGFTPLQSSTLSAVAARRETTQMSVALAWLLQRSPNILLIPGTSSTAHLRQNIAGAGLTLAEEDLTELDDINR GT:EXON 1|1-290:0| BL:SWS:NREP 1 BL:SWS:REP 8->271|YDBC_ECOLI|1e-86|64.8|264/286| SEG 122->136|lrldvldlvnlrlgn| SEG 275->287|ltlaeedlteldd| BL:PDB:NREP 1 BL:PDB:REP 17->273|1pyfA|1e-14|28.0|250/309| RP:PDB:NREP 1 RP:PDB:REP 1->274|3eauA|2e-33|21.3|258/327| RP:PFM:NREP 1 RP:PFM:REP 24->271|PF00248|7e-22|35.3|235/281|Aldo_ket_red| HM:PFM:NREP 1 HM:PFM:REP 22->289|PF00248|7.2e-54|30.9|256/284|Aldo_ket_red| GO:PFM:NREP 2 GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF00248|IPR001395| GO:PFM GO:0055114|"GO:oxidation reduction"|PF00248|IPR001395| RP:SCP:NREP 1 RP:SCP:REP 17->274|1pyfA|6e-41|26.6|252/311|c.1.7.1| HM:SCP:REP 9->292|1pyfA_|1.3e-57|35.3|278/0|c.1.7.1|1/1|NAD(P)-linked oxidoreductase| OP:NHOMO 877 OP:NHOMOORG 453 OP:PATTERN 11-1----222222221322211-2--3-231--------------------------1---2----- 339-D---------154----21115------2212313115175511-33-243--1--213151667311111222----2---1-231--1-------2---6--1----------------1-1111--111-11-----3-1-22---11-----------2215-------------232-----414222222222222222112223222122-1---1111-17-11111111111111-1121-221211-111222211--2-33------------------------------------------------------------------------1--1----------1----1-----1--2221-----123331-122332----------1-2312362234--62223348754242-1-114----21-2222222234341111-------------------------------11111221131232321-113323111111236-2-2--1112-1--1-141-111----1------------2--1---1----1----2111-1311134226----1----------1-1--1----------21----2-------1--------------------------2212-221112122211-11112211211221-111243311-----111----111-1111---------311111111111---------------131---1-----------111-11----6-2323-311----21223------------------------22131321111----------------------------1---------------------11--21222-12 ---------------1---1--1------------------------121------------------------------------2--1-1------------2---1----------------------------------------------------1-1------2-----11-----326353-45-11---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 274 STR:RPRED 94.5 SQ:SECSTR ccccEEEcTTcEEEcTccEEEcEEEEcTTccccccccccccHHHHHHHHHHHHHTTccEEEEETTGGGGHHHHHHHHHHHHHTGGcEEEEEEccccccccGGGccccHHHHHHHHHHHHHHHTcccEEEEEEccccTTcccTTTHHHHHHHHHHHHHTTcEEEEEEEcccHHHHHHHHHHHcccEEEEEccTTccHHHHHHHHHHHHccEEEEEcTTGGGGHHHHHHHHHHHHHHTccHHHHHHHHHHccTTccEEEEccccHHHHHHHHGGGG################ PSIPRED cccccEEcccccEEcccEEEccEEEEEEcccccccccccccHHHHHHHHHHHHHccccEEEcHHHHcccHHHHHHHHHHHHcccEEEEEccccccccccccccccccHHHHHHHHHHHHHHccccEEEEEEEEcccccccccccHHHHHHHHHHHHHcccEEEEEEEcccHHHHHHHHHccccccEEEEEEcccccHHHHHHHHHHcccEEEEEcccccccccccHHHHHHHHHHcccHHHHHHHHHHHcccEEEEEcccccHHHHHHHHHHccccccHHHHHHHHHHcc //