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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57804.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  13/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
d.38.1
:298 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   42->295 3bbjA PDBj 1e-17 33.5 %
:RPS:PDB   41->298 3cjyA PDBj 8e-21 17.6 %
:RPS:SCOP  52->137 1o0iA  d.38.1.5 * 8e-07 17.4 %
:RPS:SCOP  160->296 1c8uA2  d.38.1.3 * 2e-09 21.5 %
:HMM:SCOP  36->150 1c8uA1 d.38.1.3 * 2.5e-13 25.0 %
:HMM:SCOP  157->296 1c8uA2 d.38.1.3 * 1.2e-15 25.9 %
:BLT:SWISS 55->296 Y510_MYCBO 6e-08 25.4 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57804.1 GT:GENE BAD57804.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 3140752..3141648 GB:FROM 3140752 GB:TO 3141648 GB:DIRECTION + GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD57804.1 LENGTH 298 SQ:AASEQ MWCARGSRAIAAPPGARRSVAVGCAMIGVRERISMTTTAHAFDVDTASTPVGEHVYALELTDRWNTPAGTANGGYLFAVCLQALAREVPQPDLLSASGHFLRPGTPGPARVSTETARIGRRTGTGAATLLREDREIVRVLATFSDLGAAQGPTMEAGVAPVLPAPRECVDPHEGRDRGDGIGARVEYRMPELPGFFRGTPGGATTWEFWMRFADGREADPIALAALVDAAPPVVFDHGIGGSSTIELTVHIRRRPEPGWLACRVSTKHLVNGFHEEDFEIWDSSGALVAQSRQLALAF GT:EXON 1|1-298:0| BL:SWS:NREP 1 BL:SWS:REP 55->296|Y510_MYCBO|6e-08|25.4|236/291| SEG 218->234|adpialaalvdaappvv| BL:PDB:NREP 1 BL:PDB:REP 42->295|3bbjA|1e-17|33.5|239/265| RP:PDB:NREP 1 RP:PDB:REP 41->298|3cjyA|8e-21|17.6|245/249| RP:SCP:NREP 2 RP:SCP:REP 52->137|1o0iA|8e-07|17.4|86/137|d.38.1.5| RP:SCP:REP 160->296|1c8uA2|2e-09|21.5|135/171|d.38.1.3| HM:SCP:REP 36->150|1c8uA1|2.5e-13|25.0|112/0|d.38.1.3|1/1|Thioesterase/thiol ester dehydrase-isomerase| HM:SCP:REP 157->296|1c8uA2|1.2e-15|25.9|139/0|d.38.1.3|1/1|Thioesterase/thiol ester dehydrase-isomerase| OP:NHOMO 15 OP:NHOMOORG 14 OP:PATTERN -------------------------------------------------------------------- ------------------------------------1111----------------------1-111111----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2-1---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------1---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 271 STR:RPRED 90.9 SQ:SECSTR ###########################cHHHHHHHHHHTcccTTcEEEETTEEEEEccGGGEEccTTccEEcHHHHHHHHHHHHHHHTccEEEEEEEEEEcccccTTEEEEEEEEEEEccccEEEEEEEEETTEEEEEEEEEEccTTcccccccccccccccccGGGcccccccccTTccTGGGEEEEEcccTTccTTEHHHHHHEEEEEEETTcccccHHHHHHHTTHHHHHHHHHTHcccEEcEEEEEEccccccccEEEEEEEcEEETTEEEEEEEEEcTTccEEEEEEEEEEcc DISOP:02AL 1-7, 160-161, 164-172| PSIPRED cccccccEEEEcccccccEEEEEEEEEEcccccccccccccccccEEEEEEcccEEEEEEcHHHccccccccHHHHHHHHHHHHHHHcccccEEEEEEEEEccccccEEEEEEEEEccccEEEEEEEEEEEccEEEEEEEEEEccccccccccccccccccccccccccccccccccccHHHcEEEEEEEccccccccccccccEEEEEEEEcccccccHHHHHHHHHHcccHHHcccccccccEEEEEEEEcccccccEEEEEEEEEccccEEEEEEEEEcccccEEEEEEEEEEEc //