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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57807.1
DDBJ      :             putative transcriptional regulator
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  1/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.4.1
:191 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   37->145 3dpjF PDBj 7e-05 16.7 %
:HMM:SCOP  4->80 2gfnA1 a.4.1.9 * 2.2e-13 29.9 %
:HMM:PFM   14->59 PF00440 * TetR_N 1.6e-13 41.3 46/47  
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57807.1 GT:GENE BAD57807.1 GT:PRODUCT putative transcriptional regulator GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(3144461..3145036) GB:FROM 3144461 GB:TO 3145036 GB:DIRECTION - GB:PRODUCT putative transcriptional regulator GB:PROTEIN_ID BAD57807.1 LENGTH 191 SQ:AASEQ MMAYLTRAQRRRSIVDAAAAVVARAGLGAVTARAVAEELGGSPGQIHHHFASTDELAAEGWRHYATAEIESYEQAAAGLDTHAALTLFFADLVEDTDGDGRALARWAEAGAHAQLRPAVAAAYLDTLARLTDVLATVLAATHPDPGHARAAAGRLLMLGVGLAGLTRLTDRPPVPAATVMRTAIQAETTTR GT:EXON 1|1-191:0| SEG 10->36|rrrsivdaaaavvaraglgavtarava| SEG 146->165|gharaaagrllmlgvglagl| RP:PDB:NREP 1 RP:PDB:REP 37->145|3dpjF|7e-05|16.7|108/182| HM:PFM:NREP 1 HM:PFM:REP 14->59|PF00440|1.6e-13|41.3|46/47|TetR_N| HM:SCP:REP 4->80|2gfnA1|2.2e-13|29.9|77/0|a.4.1.9|1/1|Homeodomain-like| OP:NHOMO 1 OP:NHOMOORG 1 OP:PATTERN -------------------------------------------------------------------- ------------------------------------1-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 109 STR:RPRED 57.1 SQ:SECSTR ####################################HHHTcccHHHHTTcccHHHHHHHHHHHHHHHHHTHHHHHHHcccHHHHHHHHHHHHTHHHHHHHHccHHHHHHHHHHHHTcTTHHHHHHHHHHHHHHHHHHHHHHTcTT############################################## DISOP:02AL 1-10, 75-79, 187-191| PSIPRED ccccccHHHHHHHHHHHHHHHHHHHcHHcccHHHHHHHHcccHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHcccc //