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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57834.1
DDBJ      :             putative transporter
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  17/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
f.38.1
:392 amino acids
:PSIPRED
:DISOPRED
:HMM:SCOP  1->383 1pw4A_ f.38.1.1 * 1.9e-45 28.8 %
:HMM:PFM   8->323 PF07690 * MFS_1 4.9e-35 28.0 311/353  
:HMM:PFM   311->379 PF07690 * MFS_1 0.00028 27.5 69/353  
:BLT:SWISS 17->279 YBCL_BACSU 2e-15 30.4 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57834.1 GT:GENE BAD57834.1 GT:PRODUCT putative transporter GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 3171495..3172673 GB:FROM 3171495 GB:TO 3172673 GB:DIRECTION + GB:PRODUCT putative transporter GB:PROTEIN_ID BAD57834.1 LENGTH 392 SQ:AASEQ MPVWLAVLAVAALVFYTDDYVIAGVLPEIAADLDVTVGTAGRLVTVFSLTLAVAAPLAALVTARCAPRALLAGAAVVFVAANALAAVTPAFEALLAARVLAALAAAAATPTLFGLTARLAPPQRLGRYLAVVGLGVTGAIAVGVPLGTWIGAALGWRATFGAMALAGFCVAVGVAAAVPPVDATTARPREQLRALAAAPVWLGLAGNVVLMSGSMMLLTYLAPFVAGLATADTAARAALFAVSGFAGMAGLWLGGHGTDRWGADRALLIGVGVFVAAMLAFTGLWPLRPVPVALLYPLALLWAGAAFWNSPAVQARLHRLAGPAATPALAANTSGTYLGVAVGATLGGAVVDAAGPGALPPIAAAAGLVALTVFGLAARAAREPLRASAVRD GT:EXON 1|1-392:0| BL:SWS:NREP 1 BL:SWS:REP 17->279|YBCL_BACSU|2e-15|30.4|263/390| TM:NTM 13 TM:REGION 1->16| TM:REGION 22->42| TM:REGION 46->68| TM:REGION 70->92| TM:REGION 98->120| TM:REGION 129->151| TM:REGION 162->183| TM:REGION 200->222| TM:REGION 234->255| TM:REGION 263->285| TM:REGION 287->308| TM:REGION 325->347| TM:REGION 359->381| SEG 5->14|lavlavaalv| SEG 49->63|ltlavaaplaalvta| SEG 69->87|allagaavvfvaanalaav| SEG 93->117|allaarvlaalaaaaatptlfglta| SEG 164->186|alagfcvavgvaaavppvdatta| SEG 224->242|fvaglatadtaaraalfav| SEG 286->306|plrpvpvallyplallwagaa| SEG 320->331|lagpaatpalaa| SEG 339->389|gvavgatlggavvdaagpgalppiaaaaglvaltvfglaaraareplrasa| HM:PFM:NREP 2 HM:PFM:REP 8->323|PF07690|4.9e-35|28.0|311/353|MFS_1| HM:PFM:REP 311->379|PF07690|0.00028|27.5|69/353|MFS_1| HM:SCP:REP 1->383|1pw4A_|1.9e-45|28.8|379/447|f.38.1.1|1/1|MFS general substrate transporter| OP:NHOMO 18 OP:NHOMOORG 17 OP:PATTERN -------------------------------------------------------------------- -----------1-2----------------------1-------1---------1----------1-------------------------------------------------------------------------------------------------------------------------------1---------------1----1----------------1-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1--------------------------------------------------------------------------------------11-1-------------------1---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------11-------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 178-194, 388-392| PSIPRED ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc //