[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Nocardia farcinica IFM 10152 (nfar0)
Plasmid : pNF2
Gene : BAD60775.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  7/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
:621 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   85->200 PF03432 * Relaxase 2e-04 32.1 %
:HMM:PFM   81->243 PF03432 * Relaxase 3.3e-05 18.1 144/242  
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD60775.1 GT:GENE BAD60775.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210PL02 GT:ORG nfar0 GB:ACCESSION GIB00210PL02 GB:PLASMID pNF2 GB:LOCATION complement(81040..82905) GB:FROM 81040 GB:TO 82905 GB:DIRECTION - GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD60775.1 LENGTH 621 SQ:AASEQ MIPNSTKGSDIKRLLWYLAGPGRYNEHVGQRVLAGDAVTMAVFAGRINQARAWELGKLLDSPRQVLLRGDPVSVTSYQKARALMAEGMSRKAAFEAATSDENTWHCSLALHPDEGALSDEKWQAIATDFMREMGFVDAGDAVPDVRWAAVHHGPNRNGCDHIHIAMSVVRADGSLVDMMYDRPRSQRAAGRVERKHGLRVLASRETGETEAATTPAERAYMQRVGAHETDREALRRRVRAAAAATGSEAEWLRELRTQQIVVRPRFAKDSTEEVVGYSVRMPAQRNVETGVWETPRGYSGLQLGKDLTLPALRSWAGWETSETAQQEAAAEWRRLLAASDRRGARAGAHRPLDPAAQTEALAAVSRWCQRIQAIPAEDHAAVRRAASATAGLFAAASVSTEPAPGPMDRLSRQLARIGDTDPARRLPRRERADTASVRAAARLLWSTTSRQASQIALIEAMMDCFLAVAEARRAVGQAQAAEAMYSQARQALTEVHMRAAGINPDRPYESTPGSPAWVAAYRAHAHVTGEDPAITTNTILNQKALHATNTNRRVQKPMTPSRPRPWLPIEDERAARDRQAAEAATLQRLATPRRTSTRSTKAPITPPRPARGNNRDTGFER GT:EXON 1|1-621:0| SEG 205->219|etgeteaattpaera| SEG 231->244|realrrrvraaaaa| SEG 319->348|etsetaqqeaaaewrrllaasdrrgaraga| SEG 376->399|aedhaavrraasataglfaaasvs| SEG 570->584|ederaardrqaaeaa| RP:PFM:NREP 1 RP:PFM:REP 85->200|PF03432|2e-04|32.1|106/219|Relaxase| HM:PFM:NREP 1 HM:PFM:REP 81->243|PF03432|3.3e-05|18.1|144/242|Relaxase| OP:NHOMO 10 OP:NHOMOORG 7 OP:PATTERN -------------------------------------------------------------------- ------------------------------------2--1------------113----------------1----1---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-2, 5-6, 94-95, 202-224, 423-428, 477-485, 555-559, 595-621| PSIPRED ccccEEEcccccEEEEEEEcccccccccccEEEEccccHHcccccccccccHHHHHHHHcccccEEEEEcccccccccHHHHHHHHHHHHHcccccccccccEEEEEEEcccccccccHHHHHHHHHHHHHHcccccccccccccEEEEEEcccccccccEEEEEEEEEcccccEEccHHHHHHHHHHHHHHHHHHccEEccccccccccccccHHHHHHHHHHcccccHHHHHHHHHHHHHHccccHHHHHHHHHHcccEEEEEEcccccEEEEEEEEEEccccccccEEEcccccccHHHHcHHccHHHHHHHcccccccccHHHHHHHHHHHcccccHHHcccHHHccccccHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHcccHHHHccccccccccHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccEEEEEEEEccccccEEHHHHHHHHHHHccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccc //