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Nocardia farcinica IFM 10152 (nfar0)
Gene : aqpZ
DDBJ      :aqpZ         putative transmembrane water channel
Swiss-Prot:             

Homologs  Archaea  19/68 : Bacteria  423/915 : Eukaryota  107/199 : Viruses  0/175   --->[See Alignment]
f.19.1
:255 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   15->228 1rc2B PDBj 7e-33 40.8 %
:RPS:PDB   66->227 2abmA PDBj 2e-21 25.7 %
:RPS:SCOP  15->232 1rc2A  f.19.1.1 * 2e-36 47.8 %
:HMM:SCOP  4->257 1j4nA_ f.19.1.1 * 5.7e-46 38.1 %
:RPS:PFM   19->213 PF00230 * MIP 2e-14 38.8 %
:HMM:PFM   15->243 PF00230 * MIP 2.9e-50 41.5 207/227  
:BLT:SWISS 15->232 AQPZ_PHOLL 5e-48 47.8 %
:PROS 69->77|PS00221|MIP
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56242.1 GT:GENE aqpZ GT:PRODUCT putative transmembrane water channel GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 1569271..1570038 GB:FROM 1569271 GB:TO 1570038 GB:DIRECTION + GB:GENE aqpZ GB:PRODUCT putative transmembrane water channel GB:PROTEIN_ID BAD56242.1 LENGTH 255 SQ:AASEQ MVEEIAEDRRIPDGKKWAAEALGTFVLVMGGVGTAVLAGERVGALGVALAFGLTLMFLVYSIGPISGCHVNPAVTLGQLILGRVSAVNAVGYVVAQLIGAFLSGLVLFAIAKNLPSYDRRTDGLGANGWGEHSPSAKTGPLGEVVVQNGYGFAAMIIVEVMLTAILIFVVLASTDQISDVPLAGLSIGVTLAVLHLISIPVDNTSVNPARSLGVAFYQEGAAGQVWAFVVFPLIGGVLGALVYGLLFGRRREMVS GT:EXON 1|1-255:0| BL:SWS:NREP 1 BL:SWS:REP 15->232|AQPZ_PHOLL|5e-48|47.8|205/231| PROS 69->77|PS00221|MIP|PDOC00193| TM:NTM 6 TM:REGION 18->40| TM:REGION 43->65| TM:REGION 83->105| TM:REGION 151->173| TM:REGION 181->203| TM:REGION 227->248| SEG 233->248|liggvlgalvygllfg| BL:PDB:NREP 1 BL:PDB:REP 15->228|1rc2B|7e-33|40.8|201/231| RP:PDB:NREP 1 RP:PDB:REP 66->227|2abmA|2e-21|25.7|144/227| RP:PFM:NREP 1 RP:PFM:REP 19->213|PF00230|2e-14|38.8|178/227|MIP| HM:PFM:NREP 1 HM:PFM:REP 15->243|PF00230|2.9e-50|41.5|207/227|MIP| GO:PFM:NREP 3 GO:PFM GO:0005215|"GO:transporter activity"|PF00230|IPR000425| GO:PFM GO:0006810|"GO:transport"|PF00230|IPR000425| GO:PFM GO:0016020|"GO:membrane"|PF00230|IPR000425| RP:SCP:NREP 1 RP:SCP:REP 15->232|1rc2A|2e-36|47.8|205/231|f.19.1.1| HM:SCP:REP 4->257|1j4nA_|5.7e-46|38.1|231/249|f.19.1.1|1/1|Aquaporin-like| OP:NHOMO 1220 OP:NHOMOORG 549 OP:PATTERN ---------111111--------1--------12----1111111--1---1---------------2 -21-1---------2----------3-------1111211-1---1-1-11---1-11--111---1112-2111------1--------1----------1-------2--------------111-11----------1-----1-111-1----------11-1----------------311----1--111111221111222111111--2-1--1-1-2111111-111111111111111-1113211-11--11-22----3-211122111111121--22222222222-1111--11--1-122---2221-----1111111111----1----1--1---1----1----1-111--1-1-11--------211-13111-2--11111111111-1221221-22--122-11-11123-1-1-1-111111-1---------11-------------------------------------11--11-1111111-11111122111111112---1----------1---1--1--11-1------------------------1----1-11-----11-111-1-1-------------------------1121--1-----111----111--111--1----------11131-11212222222232-222222222222322222222211221222222222222221222222223--2-----------------------------111112-11-2---1111111----2-22122222-2222-111----------2222-----222221111111---1111---1------11111111--1--------------------------------1----- ----111---3-11214-1----2-2--------------------3---2222-11--------1------------------------1-4---111--1-1----41GA8AB622234434E83B6Fd9-98A-443646542631163135868A11-68712726G455--11-----22FFXQ1TE1-A7EH1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 218 STR:RPRED 85.5 SQ:SECSTR ##############THHHHHHHHHHHHHHHHHHHHHHTTTccHHHHccHHHHHHHHHHHHHHTTTccccccHHHHHHHHHTTcccTTTHHHHHHHHHHHHHHHHHHHHHHHHTcTTccHHHHGGGcccccccccHTHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcTTccTTcHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHccccHHHHHHHHHH####################### DISOP:02AL 253-255| PSIPRED cHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHcccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHcccccEEEEHHHHHHHHHHHHHHHHHHcccccccc //