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Nocardia farcinica IFM 10152 (nfar0)
Gene : argD
DDBJ      :argD         putative acetylornithine aminotransferase
Swiss-Prot:             

Homologs  Archaea  67/68 : Bacteria  792/915 : Eukaryota  190/199 : Viruses  0/175   --->[See Alignment]
c.67.1
:408 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   24->399 2e54A PDBj 2e-81 45.4 %
:RPS:PDB   13->402 3du4A PDBj 9e-85 27.5 %
:RPS:SCOP  14->387 1d7rA  c.67.1.4 * 8e-90 31.6 %
:HMM:SCOP  7->398 1qj5A_ c.67.1.4 * 1.2e-130 47.1 %
:RPS:PFM   37->348 PF00202 * Aminotran_3 1e-70 49.7 %
:HMM:PFM   36->347 PF00202 * Aminotran_3 7.4e-106 50.3 312/339  
:BLT:SWISS 12->400 ARGD_MYCTU e-131 63.5 %
:PROS 225->262|PS00600|AA_TRANSFER_CLASS_3
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56785.1 GT:GENE argD GT:PRODUCT putative acetylornithine aminotransferase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 2117128..2118354 GB:FROM 2117128 GB:TO 2118354 GB:DIRECTION + GB:GENE argD GB:PRODUCT putative acetylornithine aminotransferase GB:PROTEIN_ID BAD56785.1 LENGTH 408 SQ:AASEQ MTPVPKGDTPMSTSDLQQRWSAALMNNYGTPKVALVRGAGVVVYDADGKRYLDFLGGIAVNSLGHGHPAILAAVTQQLGTLGHVSNLYVSEPVIELAERLLAHFGDGAGKAFFCNSGTEANEAAFKIARLTGRRKIVACEEGFHGRTMGALALTGQPSKRAPFEPMPPGVVHVPYGDAAALAAAVDADTAAVFLEPIMGESGVVVPPMDYLVKAREITARHGALLVLDEVQTGIGRTGKFYAHQAAGIVPDVITLAKGLGGGLPIGAVLAQGRAADLLTPGMHGTTFGGNPVCAAAALAVLRTIDQEDLLAHVESVGKRLSDGIALLEHPLIDHVRGAGLLLGIVLTDNVSGEVEARAREAGYLVNAPKPNIVRLAPPLVLTETQADNFVVDLPAILDGAAADAKGAR GT:EXON 1|1-408:0| BL:SWS:NREP 1 BL:SWS:REP 12->400|ARGD_MYCTU|e-131|63.5|389/400| PROS 225->262|PS00600|AA_TRANSFER_CLASS_3|PDOC00519| SEG 177->191|daaalaaavdadtaa| BL:PDB:NREP 1 BL:PDB:REP 24->399|2e54A|2e-81|45.4|372/385| RP:PDB:NREP 1 RP:PDB:REP 13->402|3du4A|9e-85|27.5|389/447| RP:PFM:NREP 1 RP:PFM:REP 37->348|PF00202|1e-70|49.7|312/336|Aminotran_3| HM:PFM:NREP 1 HM:PFM:REP 36->347|PF00202|7.4e-106|50.3|312/339|Aminotran_3| GO:PFM:NREP 2 GO:PFM GO:0008483|"GO:transaminase activity"|PF00202|IPR005814| GO:PFM GO:0030170|"GO:pyridoxal phosphate binding"|PF00202|IPR005814| RP:SCP:NREP 1 RP:SCP:REP 14->387|1d7rA|8e-90|31.6|373/431|c.67.1.4| HM:SCP:REP 7->398|1qj5A_|1.2e-130|47.1|391/429|c.67.1.4|1/1|PLP-dependent transferases| OP:NHOMO 5687 OP:NHOMOORG 1049 OP:PATTERN 44221334555555541433333333342253222233333332232222343254523233228-46 49679434555342F7777-7C449I757778GBBB89EI69994444254584554422D6A3D6EDGF81111121-12263434423221322-114465768573711111112122222133333333333999A81118942432243333333333324464823433333333336554411-86AAAAAA9999B9A9998A88889BC7667744333333A836666665666666656646-------2---2222-----231111-------121------------------------2--111----36256-------2-262663111313--522442243443333332322263355571111185B695646666478887786879-456437386L72E99CBAJ99ECE6644259AA9997AE44444444655234582222222222---------------2122215643BCCB9FHHGFGADDDBEEGHFFFF7CEFD67762387A698338596CB663333485333333344447416676354446334233343355433336956412233333321322222223433333764365A344785555666555555565851-1555321-22277A83787776766677-7777766777767777776ACA8B9C366665666666666667653666632445555455555--2322222444445798444323322223223888976745487DEDEBIBH9IFFC7BFF422221222554445666668645666666755533333332443333------------------------------------1222212111643 11--443-1---11358756584B7C677333344454443444445579EDGE4865556443733774234265223356454734-46484448575484554-675A5857574535554963749e6-5664544745564444363345C7556CC4A565466K45446662e33376ABCL6887584958 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 403 STR:RPRED 98.8 SQ:SECSTR #####cccccccHHHHHHHHHHHcHHHHHHccccEEEEEcTEEEETTccEEEETTHHHHTcccccccHHHHHHHHHHHTTccccccccccHHHHHHHHHHHHHccTTEEEEEEEccHHHHHHHHHHHHHHTTccEEEEETTccccccHHHHHTcccTTTccccGGGcccEEEEcccccTTcccccHHHHHHHHHccEEcTTTcEEccTTHHHHHHHHHHHTTcEEEEEcTTTTTTTTccccGGGGGTccccEEEEcGGGGTTcccEEEEEEHHHHGGGcccccccTTTTcHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHTTcTTEEEEEEETTEEEEEEcccHHHHHHHHHHHTTEEcccEETTEEEEcccTTccHHHHHHHHHHHHHHHHHHHTcccHHc DISOP:02AL 1-16| PSIPRED cccccccccHHHHHHHHHHHHHHHccccccccEEEEEccEEEEEEcccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHccccccEEEEcccccHHHHHHHHHHHHHcccEEEEEEcccccccHHHHEEccccccccccccccccEEEEccccHHHHHHHccccEEEEEEEEEccccccccccHHHHHHHHHHHHHcccEEEEEcccccccHHccccEEEccccEEEEEEEEcHHHccccEEEEEEcHHHHHHHccccccccccccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHccccEEEEccEEEEEEEEcccHHHHHHHHHHHccEEEEEccccEEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHccc //