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Nocardia farcinica IFM 10152 (nfar0)
Gene : argF
DDBJ      :argF         putative ornithine carbamoyltransferase
Swiss-Prot:             

Homologs  Archaea  67/68 : Bacteria  829/915 : Eukaryota  187/199 : Viruses  1/175   --->[See Alignment]
c.78.1
:316 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   6->310 2i6uA PDBj e-116 74.4 %
:RPS:PDB   6->308 3d6nB PDBj 1e-77 20.7 %
:RPS:SCOP  1->148 1a1sA1  c.78.1.1 * 5e-45 41.9 %
:RPS:SCOP  150->312 1a1sA2  c.78.1.1 * 6e-36 45.1 %
:HMM:SCOP  1->314 1tugA1 c.78.1.1 * 1.4e-103 47.7 %
:RPS:PFM   46->146 PF02729 * OTCace_N 1e-23 48.5 %
:RPS:PFM   151->307 PF00185 * OTCace 1e-28 43.2 %
:HMM:PFM   152->307 PF00185 * OTCace 7.9e-51 43.9 155/158  
:HMM:PFM   7->145 PF02729 * OTCace_N 8.6e-47 44.2 138/142  
:BLT:SWISS 2->313 OTC_RHOOB e-127 71.8 %
:PROS 50->57|PS00097|CARBAMOYLTRANSFERASE
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56786.1 GT:GENE argF GT:PRODUCT putative ornithine carbamoyltransferase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 2118351..2119301 GB:FROM 2118351 GB:TO 2119301 GB:DIRECTION + GB:GENE argF GB:PRODUCT putative ornithine carbamoyltransferase GB:PROTEIN_ID BAD56786.1 LENGTH 316 SQ:AASEQ MMSGELRHFLRDDDVSPTEQAEILALAAELKRAPFSRRPLEGPRGVGVIFEKNSTRTRFSFEMGIAQLGGHAVVVDGRDTQLGREETLADTGRVLSRYVDAVVWRTFEQSRLDEMASAATVPVVNALSNEFHPCQVLADLLTLTERKGDLAGRKLAYFGDGANNMAHSLLLGGVTAGLNVTIAAPAGFEPLPWVLEAARKRAADTGATVTVTGDPQAAAEGADALVTDTWTSMGQENDGLDRVGPFRPFRLDAALLAEAKPDVSVLHCLPAHRGDEITDEVLDGPHSAVWDEAENRLHAQKALLVWLLAKREGAAL GT:EXON 1|1-316:0| BL:SWS:NREP 1 BL:SWS:REP 2->313|OTC_RHOOB|e-127|71.8|312/315| PROS 50->57|PS00097|CARBAMOYLTRANSFERASE|PDOC00091| SEG 19->30|eqaeilalaael| SEG 202->214|aadtgatvtvtgd| BL:PDB:NREP 1 BL:PDB:REP 6->310|2i6uA|e-116|74.4|305/307| RP:PDB:NREP 1 RP:PDB:REP 6->308|3d6nB|1e-77|20.7|285/291| RP:PFM:NREP 2 RP:PFM:REP 46->146|PF02729|1e-23|48.5|101/142|OTCace_N| RP:PFM:REP 151->307|PF00185|1e-28|43.2|155/157|OTCace| HM:PFM:NREP 2 HM:PFM:REP 152->307|PF00185|7.9e-51|43.9|155/158|OTCace| HM:PFM:REP 7->145|PF02729|8.6e-47|44.2|138/142|OTCace_N| GO:PFM:NREP 5 GO:PFM GO:0006520|"GO:cellular amino acid metabolic process"|PF02729|IPR006132| GO:PFM GO:0016743|"GO:carboxyl- or carbamoyltransferase activity"|PF02729|IPR006132| GO:PFM GO:0006520|"GO:cellular amino acid metabolic process"|PF00185|IPR006131| GO:PFM GO:0016597|"GO:amino acid binding"|PF00185|IPR006131| GO:PFM GO:0016743|"GO:carboxyl- or carbamoyltransferase activity"|PF00185|IPR006131| RP:SCP:NREP 2 RP:SCP:REP 1->148|1a1sA1|5e-45|41.9|148/150|c.78.1.1| RP:SCP:REP 150->312|1a1sA2|6e-36|45.1|162/163|c.78.1.1| HM:SCP:REP 1->314|1tugA1|1.4e-103|47.7|304/0|c.78.1.1|1/1|Aspartate/ornithine carbamoyltransferase| OP:NHOMO 1905 OP:NHOMOORG 1084 OP:PATTERN 22323212111111112122222212212112222222222221222222222211121122224-22 1222212222212111111-1111111111112111111122121212111111111111324111221122222222227421122211111211----111111122----------------222222222121112211221111111111222221122211111111111111111122211121221222223323223332223322332222212312221122-22222222322223443212-2----1---1111--2-211-32222211111211111111111111111111111111111111111221232222222222222222222123222132112221212322221-2212311112--2112332111112111111111112-111111112121211112112222211113112222111111111112112212211-11111---------------------21222222222322222222222233333323224111111111112111121221111111332222222111111122211311221111222222222222223212212211111112111111122212114332122322222222226222222222221-3312221122234223324334443433-33433343433333333332222222233333233333333333222222321222222222222111311111111121222111111111-11--111111111111222222222222223122211111111122252222222421122222222211111111222222111111111---------12-1------111-----1222211111121 11---12-311111222212222212222222222222221221222222222222222222223222222122222-2222222221-21222221111221364-22141131121222-22432224A2-32211112122112112221221211--3121111116113-1222H2221232222221131211 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------1--- STR:NPRED 312 STR:RPRED 98.7 SQ:SECSTR #cccTccccccGGGccHHHHHHHHHHHHHHHTTcHHccccccTcEEEEEEccccHHHHHHHHHHHHHTTcEEEEEETTTTcccTTccHHHHHHHHHHTTccEEEEEccccccHHHHHTcccEEEEEETTTccHHHHHHHHHHHHHHHcccTTcEEEEEcccTcHHHHHHHHHHHHTTcEEEEEccGGGccccTTGGGGcHTTccEEEEEEEEccHHHHHHHccEEEEccEccccTHHHHTTccccHHHHHHHHcccHHHTTcccEEcccccccTTTccGGGcccTTccHHHHHHHHHHHHHHHHHHHcHHTcc### DISOP:02AL 1-4, 314-316| PSIPRED ccccccccEEEHHcccHHHHHHHHHHHHHHHHccccccccccccEEEEEEccccccHHHHHHHHHHHHccEEEEEccccEEEcccccHHHHHHHHHHHccEEEEEEcccHHHHHHHHHccccEEEcccccccHHHHHHHHHHHHHHcccccccEEEEEccccccHHHHHHHHHHHcccEEEEEccccccccHHHHHHHHHHHHHcccEEEEEEcHHHHHccccEEEEEEEEEEcccccHHHHHHHHHcccccHHHHHHcccccEEEccccccccccccHHHHccccHHHHHHHHccHHHHHHHHHHHHcccccccc //