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Nocardia farcinica IFM 10152 (nfar0)
Gene : argR
DDBJ      :argR         putative transcriptional regulator
Swiss-Prot:ARGR_NOCFA   RecName: Full=Arginine repressor;

Homologs  Archaea  0/68 : Bacteria  268/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.4.5d.74.2
:175 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   16->174 3fhzD PDBj 9e-64 78.6 %
:RPS:PDB   14->69 2ahqA PDBj 1e-04 16.1 %
:RPS:PDB   106->174 1b4bA PDBj 8e-17 36.2 %
:RPS:SCOP  24->88 1b4aA1  a.4.5.3 * 4e-14 32.8 %
:RPS:SCOP  106->174 1b4bA  d.74.2.1 * 6e-17 36.2 %
:HMM:SCOP  17->94 1aoyA_ a.4.5.3 * 3.7e-18 41.6 %
:HMM:SCOP  105->175 1b4bA_ d.74.2.1 * 3.5e-16 49.3 %
:RPS:PFM   26->88 PF01316 * Arg_repressor 6e-10 46.8 %
:RPS:PFM   105->174 PF02863 * Arg_repressor_C 5e-11 42.9 %
:HMM:PFM   22->90 PF01316 * Arg_repressor 6.9e-26 48.5 68/70  
:HMM:PFM   106->174 PF02863 * Arg_repressor_C 2.6e-24 49.3 69/70  
:BLT:SWISS 1->175 ARGR_NOCFA 5e-89 100.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56787.1 GT:GENE argR GT:PRODUCT putative transcriptional regulator GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 2119363..2119890 GB:FROM 2119363 GB:TO 2119890 GB:DIRECTION + GB:GENE argR GB:PRODUCT putative transcriptional regulator GB:PROTEIN_ID BAD56787.1 LENGTH 175 SQ:AASEQ MSVSTPERGGAEQGKGPAIARTRAGRQSRIVELLSAHAVRSQSELAALLAAEGIETTQATLSRDLDELGAVKLRAADGGAGVYVVPEDGSPVRGVTGGTDRLSKLLGDLLVSTDASGNIAVLRTPPGAAGYLASALDRAALPYVVGTIAGDDTIAVIAREPLTGAELAAKIEELA GT:EXON 1|1-175:0| SW:ID ARGR_NOCFA SW:DE RecName: Full=Arginine repressor; SW:GN Name=argR; OrderedLocusNames=NFA_19410; SW:KW Amino-acid biosynthesis; Arginine biosynthesis; Complete proteome;Cytoplasm; DNA-binding; Repressor; Transcription;Transcription regulation. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->175|ARGR_NOCFA|5e-89|100.0|175/175| GO:SWS:NREP 6 GO:SWS GO:0008652|"GO:cellular amino acid biosynthetic process"|Amino-acid biosynthesis| GO:SWS GO:0006526|"GO:arginine biosynthetic process"|Arginine biosynthesis| GO:SWS GO:0005737|"GO:cytoplasm"|Cytoplasm| GO:SWS GO:0003677|"GO:DNA binding"|DNA-binding| GO:SWS GO:0006350|"GO:transcription"|Transcription| GO:SWS GO:0045449|"GO:regulation of transcription"|Transcription regulation| SEG 45->51|laallaa| BL:PDB:NREP 1 BL:PDB:REP 16->174|3fhzD|9e-64|78.6|159/166| RP:PDB:NREP 2 RP:PDB:REP 14->69|2ahqA|1e-04|16.1|56/67| RP:PDB:REP 106->174|1b4bA|8e-17|36.2|69/71| RP:PFM:NREP 2 RP:PFM:REP 26->88|PF01316|6e-10|46.8|62/69|Arg_repressor| RP:PFM:REP 105->174|PF02863|5e-11|42.9|70/70|Arg_repressor_C| HM:PFM:NREP 2 HM:PFM:REP 22->90|PF01316|6.9e-26|48.5|68/70|Arg_repressor| HM:PFM:REP 106->174|PF02863|2.6e-24|49.3|69/70|Arg_repressor_C| GO:PFM:NREP 4 GO:PFM GO:0003700|"GO:transcription factor activity"|PF01316|IPR001669| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF01316|IPR001669| GO:PFM GO:0003700|"GO:transcription factor activity"|PF02863|IPR001669| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF02863|IPR001669| RP:SCP:NREP 2 RP:SCP:REP 24->88|1b4aA1|4e-14|32.8|64/75|a.4.5.3| RP:SCP:REP 106->174|1b4bA|6e-17|36.2|69/72|d.74.2.1| HM:SCP:REP 17->94|1aoyA_|3.7e-18|41.6|77/0|a.4.5.3|1/1|"Winged helix" DNA-binding domain| HM:SCP:REP 105->175|1b4bA_|3.5e-16|49.3|71/71|d.74.2.1|1/1|C-terminal domain of arginine repressor| OP:NHOMO 302 OP:NHOMOORG 268 OP:PATTERN -------------------------------------------------------------------- 1111111111111111111-11111111111111111111111111111---111111--11121121111111111111111-----1111-1------------------------11-----11111111111-----------------------------------------------1111111-1111111111111111111122111111111111-----111111111111111111111113-1-11-1---2222--2--22-11122221111-1111111111112122222222221122111222211111---11-11111-111111111--111111111111-1111111--1-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------11111---------------------------------1---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-111--- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 161 STR:RPRED 92.0 SQ:SECSTR #############ccccccHHHHcHHHHHHHHHHHHcccccHHHHHHHHHHTTccccHHHHHHHHHHTTcEEEEcccccEEEEcTTcccccHHHHHHHHHHHHHHHHHHEEEEEEETTEEEEEEcTTcHHHHHHHHHHHccTTEEEEEEcccEEEEEEccHHHHHHHHHHHHTT# DISOP:02AL 1-23, 91-99| PSIPRED ccccccccccccccccccccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHcccEEcHHHHHHHHHHccEEEEEcccccEEEEEEcccccccccccccHHHHHHHHHHHHHEEEEcccEEEEEEccccHHHHHHHHHHcccccEEEEEEcccEEEEEEccHHHHHHHHHHHHHcc //