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Nocardia farcinica IFM 10152 (nfar0)
Gene : argS
DDBJ      :argS         putative arginyl-tRNA synthetase
Swiss-Prot:SYR_NOCFA    RecName: Full=Arginyl-tRNA synthetase;         EC=6.1.1.19;AltName: Full=Arginine--tRNA ligase;         Short=ArgRS;

Homologs  Archaea  62/68 : Bacteria  830/915 : Eukaryota  83/199 : Viruses  0/175   --->[See Alignment]
a.27.1c.26.1d.67.2
:552 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   125->552 3fnrA PDBj 4e-58 33.3 %
:RPS:PDB   23->552 1bs2A PDBj 4e-46 20.9 %
:RPS:SCOP  20->97 1iq0A3  d.67.2.1 * 2e-14 22.4 %
:RPS:SCOP  114->419 1bs2A2  c.26.1.1 * 2e-56 22.6 %
:RPS:SCOP  428->552 1iq0A1  a.27.1.1 * 2e-28 38.7 %
:HMM:SCOP  4->113 1bs2A3 d.67.2.1 * 1.6e-30 44.3 %
:HMM:SCOP  114->441 1bs2A2 c.26.1.1 * 1.7e-77 39.6 %
:HMM:SCOP  423->552 1iq0A1 a.27.1.1 * 4.8e-33 44.7 %
:RPS:PFM   31->93 PF03485 * Arg_tRNA_synt_N 1e-14 49.2 %
:RPS:PFM   102->393 PF00750 * tRNA-synt_1d 1e-53 43.9 %
:RPS:PFM   374->403 PF09334 * tRNA-synt_1g 1e-04 56.7 %
:RPS:PFM   429->552 PF05746 * DALR_1 7e-26 52.5 %
:HMM:PFM   102->414 PF00750 * tRNA-synt_1d 1.3e-106 42.3 310/354  
:HMM:PFM   429->552 PF05746 * DALR_1 7.7e-36 51.3 119/119  
:HMM:PFM   11->93 PF03485 * Arg_tRNA_synt_N 8.2e-26 42.5 80/83  
:BLT:SWISS 1->552 SYR_NOCFA 0.0 100.0 %
:PROS 132->141|PS00178|AA_TRNA_LIGASE_I
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55892.1 GT:GENE argS GT:PRODUCT putative arginyl-tRNA synthetase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 1154744..1156402 GB:FROM 1154744 GB:TO 1156402 GB:DIRECTION + GB:GENE argS GB:PRODUCT putative arginyl-tRNA synthetase GB:PROTEIN_ID BAD55892.1 LENGTH 552 SQ:AASEQ MTPADLADLLRATAAKVLAERGLDPAVLPDEVTVERPRNPEHGDYATNLAMKVAKKAGTNPRDLAGWLAEALGAADGITSAEVAGPGFLNIRLAAAAQGAVLEQVLAAGSGYGTADTLRGTKINLEFVSANPTGPIHLGGTRWASVGDALGRILAAQGADVTREYYFNDHGAQIDRFANSLVAAATGQPTPDDGYAGAYIGEIAEQIVAEHPEAPTLPADQRHELFRAEGVELMFAHIKRTLHEFGTDFDVYFNESTLFASGAVEQAVETLKASGDLYEKDGAWWIASSEYGDDQDRVVIKSDGNAAYIAGDIAYFQNKRSRGFDLCIYMLGADHHGYIGRLKAAAAAFGDDPATVEVLIGQMVNLVRDGQAVKMSKRAGTVVTLDDLVEAIGVDAARYALVRWSVNSSVDIDLNLWTSQKNENPVYYVQYAHARTASIGRNAAAFDYASVTPDLSQLTAEEEGELIRTIGEYPRVVASAASLREPHRVARYLEELAGAYHRFQTNSKLRVLPLGDDPVSPLNAARLVLVNATRQVLANGLALLGVSAPEQM GT:EXON 1|1-552:0| SW:ID SYR_NOCFA SW:DE RecName: Full=Arginyl-tRNA synthetase; EC=6.1.1.19;AltName: Full=Arginine--tRNA ligase; Short=ArgRS; SW:GN Name=argS; OrderedLocusNames=NFA_10470; SW:KW Aminoacyl-tRNA synthetase; ATP-binding; Complete proteome; Cytoplasm;Ligase; Nucleotide-binding; Protein biosynthesis. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->552|SYR_NOCFA|0.0|100.0|552/552| GO:SWS:NREP 6 GO:SWS GO:0004812|"GO:aminoacyl-tRNA ligase activity"|Aminoacyl-tRNA synthetase| GO:SWS GO:0005524|"GO:ATP binding"|ATP-binding| GO:SWS GO:0005737|"GO:cytoplasm"|Cytoplasm| GO:SWS GO:0016874|"GO:ligase activity"|Ligase| GO:SWS GO:0000166|"GO:nucleotide binding"|Nucleotide-binding| GO:SWS GO:0006412|"GO:translation"|Protein biosynthesis| PROS 132->141|PS00178|AA_TRNA_LIGASE_I|PDOC00161| SEG 4->15|adladllrataa| SEG 64->77|lagwlaealgaadg| SEG 344->348|aaaaa| BL:PDB:NREP 1 BL:PDB:REP 125->552|3fnrA|4e-58|33.3|412/449| RP:PDB:NREP 1 RP:PDB:REP 23->552|1bs2A|4e-46|20.9|516/603| RP:PFM:NREP 4 RP:PFM:REP 31->93|PF03485|1e-14|49.2|63/85|Arg_tRNA_synt_N| RP:PFM:REP 102->393|PF00750|1e-53|43.9|289/350|tRNA-synt_1d| RP:PFM:REP 374->403|PF09334|1e-04|56.7|30/363|tRNA-synt_1g| RP:PFM:REP 429->552|PF05746|7e-26|52.5|118/118|DALR_1| HM:PFM:NREP 3 HM:PFM:REP 102->414|PF00750|1.3e-106|42.3|310/354|tRNA-synt_1d| HM:PFM:REP 429->552|PF05746|7.7e-36|51.3|119/119|DALR_1| HM:PFM:REP 11->93|PF03485|8.2e-26|42.5|80/83|Arg_tRNA_synt_N| GO:PFM:NREP 21 GO:PFM GO:0000166|"GO:nucleotide binding"|PF03485|IPR005148| GO:PFM GO:0004814|"GO:arginine-tRNA ligase activity"|PF03485|IPR005148| GO:PFM GO:0005524|"GO:ATP binding"|PF03485|IPR005148| GO:PFM GO:0005737|"GO:cytoplasm"|PF03485|IPR005148| GO:PFM GO:0006412|"GO:translation"|PF03485|IPR005148| GO:PFM GO:0006420|"GO:arginyl-tRNA aminoacylation"|PF03485|IPR005148| GO:PFM GO:0000166|"GO:nucleotide binding"|PF00750|IPR015945| GO:PFM GO:0004814|"GO:arginine-tRNA ligase activity"|PF00750|IPR015945| GO:PFM GO:0005524|"GO:ATP binding"|PF00750|IPR015945| GO:PFM GO:0005737|"GO:cytoplasm"|PF00750|IPR015945| GO:PFM GO:0006412|"GO:translation"|PF00750|IPR015945| GO:PFM GO:0006420|"GO:arginyl-tRNA aminoacylation"|PF00750|IPR015945| GO:PFM GO:0000166|"GO:nucleotide binding"|PF09334|IPR015413| GO:PFM GO:0004812|"GO:aminoacyl-tRNA ligase activity"|PF09334|IPR015413| GO:PFM GO:0005524|"GO:ATP binding"|PF09334|IPR015413| GO:PFM GO:0005737|"GO:cytoplasm"|PF09334|IPR015413| GO:PFM GO:0006412|"GO:translation"|PF09334|IPR015413| GO:PFM GO:0006418|"GO:tRNA aminoacylation for protein translation"|PF09334|IPR015413| GO:PFM GO:0004814|"GO:arginine-tRNA ligase activity"|PF05746|IPR008909| GO:PFM GO:0005524|"GO:ATP binding"|PF05746|IPR008909| GO:PFM GO:0006420|"GO:arginyl-tRNA aminoacylation"|PF05746|IPR008909| RP:SCP:NREP 3 RP:SCP:REP 20->97|1iq0A3|2e-14|22.4|76/96|d.67.2.1| RP:SCP:REP 114->419|1bs2A2|2e-56|22.6|296/348|c.26.1.1| RP:SCP:REP 428->552|1iq0A1|2e-28|38.7|119/126|a.27.1.1| HM:SCP:REP 4->113|1bs2A3|1.6e-30|44.3|106/131|d.67.2.1|1/1|Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain| HM:SCP:REP 114->441|1bs2A2|1.7e-77|39.6|318/348|c.26.1.1|1/1|Nucleotidylyl transferase| HM:SCP:REP 423->552|1iq0A1|4.8e-33|44.7|123/126|a.27.1.1|1/1|Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases| OP:NHOMO 1016 OP:NHOMOORG 975 OP:PATTERN 11-1-11-11111111111111111--11111111111111111111111111111111111111-11 -1-121111111111-111-111111111111111111111121111111111121111121111111-2-11111111111111111111-1111----1-11-11111---------------111111111111----11121111111111111-1--111111111-1-----1---1111-111111122222122222222222111122211121111111111211111111111111111111111111111111111111111111111111-11111111111111111111111111111111111111111-11111111111111111111-111-1111111111111111111111111111-11111112111111111111111111111-11112111111111111111111111111111111111111111111111111111111111111111111111111111111111112111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-11111------11111-11111111111-111111111111111111------111111111111111111111111111--111111111111---11111111111111-11111111111111-111-1111111-111111111111111-11111111111111111111111111111111111111111111111111111-11-11-----1-111111111111111111111111111111-1 ----------------11-1111-----1-1111211111111-1-11111111111111111-11-1--1-11112-121----111----1---1---1--321--21---111-------1------------1-------1--------1----1----------1----1111--21-1-1------11111-- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 530 STR:RPRED 96.0 SQ:SECSTR ######################ccccHHHHHHHccccccGGGccEEEEGGGGccTTHTccHHHHHHHHHHHcccTTTEEEEEEETTEEEEEEcHHHHHHHHHHHHHHHGGGTTccccccccEEEEEcccccTTccccHHHHHHHHHHHHHHHHHHHTTcEEEEEcccccccHHHHHHHHHHTcHTTHHHccHHHHHHcHHHHHHHHHHHHHHccccccTTTcHHHHHHHHHTTcccHHHHHHHHTTcccccccccTTccHHHHHHHHHHHHHHTcccccTTcEEEEGGGTcTTccEEEEEETTTEEcHHHHHHHHHHHHHHHcccEEEEEccGGGHHHHHHHHHHHHHTccGGGGGEEccHHHHHHHHHHHHHHHHHHcTTTcccHHHHHHHHHHHHHHHHHcccTTccEEccHHHHHccccccHTHHHHHHHHHHHHHHccccTTHHHHHTccGGGcccHHHHHHHHHHHTHHHHHHHHHHHTcTHHHHHHHHHHHHHHHHHHHHcccTTccHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHTccccccc DISOP:02AL 552-553| PSIPRED ccHHHHHHHHHHHHHHHHHHccccccccccccEEEcccccccccEEHHHHHHHHHHccccHHHHHHHHHHHcccccccccEEEccccEEEEEEcHHHHHHHHHHHHHccHHccccccccccEEEEEEEcccccccccccHHHHHHHHHHHHHHHHHcccEEEEEcccccHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEcccHHHcccHHHHHHHHHHHcccEEEccccEEEEEccccccccEEEEEccccccHHHHHHHHHHHHHcccccEEEEEEcccHHHHHHHHHHHHHHcccccccccEEEEEEEEEEccccEEEEEEccccEEEHHHHHHHHcHHHHHHHHHHcccccccEEEHHHHHHHcccccHHHHHHHHHHHHHHHHHHcccccccccccHHHcccHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHcccEEccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccc //