[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Nocardia farcinica IFM 10152 (nfar0)
Gene : aroG1
DDBJ      :aroG1        putative 3-deoxy-D-arabinoheptulosonate-7- phosphate synthase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  461/915 : Eukaryota  101/199 : Viruses  0/175   --->[See Alignment]
c.1.10
:360 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   18->360 1n8fA PDBj e-100 53.2 %
:RPS:PDB   42->360 3e9aA PDBj 8e-35 12.8 %
:RPS:SCOP  16->360 1gg1A  c.1.10.4 * e-137 53.6 %
:HMM:SCOP  16->361 1gg1A_ c.1.10.4 * 7.5e-136 56.2 %
:RPS:PFM   54->346 PF00793 * DAHP_synth_1 1e-51 52.1 %
:HMM:PFM   54->348 PF00793 * DAHP_synth_1 1.8e-91 45.8 260/272  
:BLT:SWISS 15->360 AROG_ECOLI e-101 53.4 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55468.1 GT:GENE aroG1 GT:PRODUCT putative 3-deoxy-D-arabinoheptulosonate-7- phosphate synthase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 645163..646245 GB:FROM 645163 GB:TO 646245 GB:DIRECTION + GB:GENE aroG1 GB:PRODUCT putative 3-deoxy-D-arabinoheptulosonate-7- phosphate synthase GB:PROTEIN_ID BAD55468.1 LENGTH 360 SQ:AASEQ MTTAADVDARHSDLDDQRTLSVSPLRSPAEVRMVHPITDDLADTVRAGRKATVEVLDGTDDRLMVIVGPCSVHDPAAALDYARRLAAKAAELDDRLHVVMRVYFEKPRTSLGWKGLVNDPHLDGSFDVNTGLGIGRKLLVDITALGLPVACEFLDPITPQYIADLVSYGAIGARTAASQVHRQLSSALSMPVGIKNGTDGDVQVAVDGVRAAAASHVFPGTDLDGRAALIRTTGNPDCHVILRGGSNGTNYDAASVAEACLRLEKAGLARRVVVDASHGNSNKDHNKQVDVVADIAERIAGGEREVVGVMLESFLVAGRQDLTLGRSADLVYGQSITDACLDWETTAAQLDRLAEAVAAR GT:EXON 1|1-360:0| BL:SWS:NREP 1 BL:SWS:REP 15->360|AROG_ECOLI|e-101|53.4|343/350| SEG 76->96|aaaldyarrlaakaaelddrl| BL:PDB:NREP 1 BL:PDB:REP 18->360|1n8fA|e-100|53.2|340/343| RP:PDB:NREP 1 RP:PDB:REP 42->360|3e9aA|8e-35|12.8|266/275| RP:PFM:NREP 1 RP:PFM:REP 54->346|PF00793|1e-51|52.1|257/278|DAHP_synth_1| HM:PFM:NREP 1 HM:PFM:REP 54->348|PF00793|1.8e-91|45.8|260/272|DAHP_synth_1| GO:PFM:NREP 1 GO:PFM GO:0009058|"GO:biosynthetic process"|PF00793|IPR006218| RP:SCP:NREP 1 RP:SCP:REP 16->360|1gg1A|e-137|53.6|338/339|c.1.10.4| HM:SCP:REP 16->361|1gg1A_|7.5e-136|56.2|340/0|c.1.10.4|1/1|Aldolase| OP:NHOMO 1053 OP:NHOMOORG 562 OP:PATTERN -------------------------------------------------------------------- 11--1--1111-1--1-----1---1------11111111-----11-1---111-----11--111---12222222----1-----------------------------------------11111111111111111-----1-11---1111111111--11111-111111111111111------------------------------------------------------------------------------------------212111----12222222222222-------------222122222-----2------------11----1-----11--11---------------1-1111--------111---1-1-----------------------1--1---11-111---------1-----1----------------------------------------------------2221222222222222222222221222212221122221222232221112111121111111111-222--1------------1111111122222-11----------------------------4421213-1-23333333333333333333111111111111133333333334334433-333333333334333333333333333333333333323333333333333313233333323331111111111111122212222-2211112112222222211121222222222222222221111111111333423333333441111111111111111--11------------1-------------------------------------131 ------------1122222233422232222222223222322222222222221222222222322222223332223221222222-23222222222262436-21-------------------------------------------------------------2------------------3----4233- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 346 STR:RPRED 96.1 SQ:SECSTR ##############ccTccccccccccHHHHHHHccccHHHccccccccEEETTEEEcTTcccEEEEEEEEcccHHHHHHHHHHHHHHHHHHTcEEcEEEEEEcccTTcccccccccHHHHHHHHHHHHHcHHHHHHHHHHHHHHccEEEEEcccGGGHHHHHTTccEEEEcGGGTTcHHHHHHHHHTTcEEEEEccTTccGGGGHHHHHHHccTTEEEEGGHHHHHHHHHHTTcccEEEEEccEEcccccEEccTHHTHHHHHHHTTcccEEEEHHHHTccGGGHHHHHHHHHHTHHHHHHHHcccEEEEEEEccGGGTcEEGGGHccccGGGcEEGGGGGHHHHHHHHHHHHHHHHHc DISOP:02AL 1-13, 359-360| PSIPRED cccccccccccccccccEEEEEcccccHHHHHHHccccHHHHHHHHHHHHHHHHHHcccccEEEEEEcccccccHHHHHHHHHHHHHHHHHHcccEEEEEEEEccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHccccHHHHHHHcccHHHHHHHHHHHHccccccccHHHHHHHccccccEEEcccccccHHHHHHHHHHHHcccccccccccccEEEEEEcccccEEEEEEcccccccccHHHHHHHHHHHHHccccccEEEEcccccccccHHHHHHHHHHHHHHHHcccccEEEEEEEEEEccccccccccccccccccEEEEcccccHHHHHHHHHHHHHHHHcc //