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Nocardia farcinica IFM 10152 (nfar0)
Gene : atpA
DDBJ      :atpA         putative ATP synthase alpha subunit
Swiss-Prot:ATPA_NOCFA   RecName: Full=ATP synthase subunit alpha;         EC=3.6.3.14;AltName: Full=F-ATPase subunit alpha;AltName: Full=ATP synthase F1 sector subunit alpha;

Homologs  Archaea  68/68 : Bacteria  907/915 : Eukaryota  196/199 : Viruses  0/175   --->[See Alignment]
a.69.1b.49.1c.37.1
:545 amino acids
:PSIPRED
:DISOPRED
:BLT:PDB   30->511 2qe7A PDBj e-159 60.0 %
:RPS:PDB   28->513 2ck3A PDBj e-114 50.8 %
:RPS:SCOP  28->97 1bmfA2  b.49.1.1 * 4e-12 44.3 %
:RPS:SCOP  98->377 1bmfD3  c.37.1.11 * 8e-77 24.2 %
:RPS:SCOP  383->513 1bmfA1  a.69.1.1 * 2e-27 32.1 %
:HMM:SCOP  12->97 1mabA2 b.49.1.1 * 3.3e-26 48.8 %
:HMM:SCOP  98->382 1e79A3 c.37.1.11 * 1.7e-101 47.0 %
:HMM:SCOP  383->511 1fx0A1 a.69.1.1 * 5.3e-43 52.7 %
:RPS:PFM   151->375 PF00006 * ATP-synt_ab 4e-25 34.0 %
:HMM:PFM   151->375 PF00006 * ATP-synt_ab 4.5e-68 32.1 215/215  
:HMM:PFM   387->486 PF00306 * ATP-synt_ab_C 2.5e-22 37.0 100/113  
:HMM:PFM   28->95 PF02874 * ATP-synt_ab_N 6.6e-17 36.8 68/69  
:BLT:SWISS 1->545 ATPA_NOCFA 0.0 100.0 %
:PROS 366->375|PS00152|ATPASE_ALPHA_BETA
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55908.1 GT:GENE atpA GT:PRODUCT putative ATP synthase alpha subunit GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 1171876..1173513 GB:FROM 1171876 GB:TO 1173513 GB:DIRECTION + GB:GENE atpA GB:PRODUCT putative ATP synthase alpha subunit GB:PROTEIN_ID BAD55908.1 LENGTH 545 SQ:AASEQ MAELTISSDEIRSAIESYTQSYTPETSIEEVGVVTDTSDGIAHVSGLPSAMANELLEFPGGVLGVALNLEDREIGAVILGEFAEIEEGQQVRRTGDVLSVPVGDKFLGRVVNPLGQPIDGLGEIEAEEQRVLELQAATVLQRQPVEEPLATGITAIDALTAIGRGQRQLIIGDRKTGKTAVCIDAILNQKANWETGDPTKQVRCIYVAIGQKGSTIAGVKAALEEHGALEYTTIVAAPASDSAGFKWLAPYTGSAIGQHWMYQGKHVLIVFDDLTKQAEAYRAISLLLRRPPGREAYPGDVFYLHSRLLERCAKLSDEMGGGSMTGLPIIETKANDISAFIPTNVISITDGQVFLESDLFNKGVRPAINVGTSVSRVGGAAQTKGMKKVAGSLRLEMAQYRELEAFSAFASDLDAASLAQLERGARWVELLKQDQYSPVPVEDQIVSIFLVDQGYYDSVPVGDIRRFNAELLEDLHRSAADAFKSIEGGKVLEGEAAEAIKAATDKFKQGFLASDGSRVVNEAAAGELGHEEVESLSVTRKHVEK GT:EXON 1|1-545:0| SW:ID ATPA_NOCFA SW:DE RecName: Full=ATP synthase subunit alpha; EC=3.6.3.14;AltName: Full=F-ATPase subunit alpha;AltName: Full=ATP synthase F1 sector subunit alpha; SW:GN Name=atpA; OrderedLocusNames=NFA_10630; SW:KW ATP synthesis; ATP-binding; Cell membrane; CF(1); Complete proteome;Hydrogen ion transport; Hydrolase; Ion transport; Membrane;Nucleotide-binding; Transport. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->545|ATPA_NOCFA|0.0|100.0|545/545| GO:SWS:NREP 10 GO:SWS GO:0006754|"GO:ATP biosynthetic process"|ATP synthesis| GO:SWS GO:0005524|"GO:ATP binding"|ATP-binding| GO:SWS GO:0005886|"GO:plasma membrane"|Cell membrane| GO:SWS GO:0045261|"GO:proton-transporting ATP synthase complex, catalytic core F(1)"|CF(1)| GO:SWS GO:0015992|"GO:proton transport"|Hydrogen ion transport| GO:SWS GO:0016787|"GO:hydrolase activity"|Hydrolase| GO:SWS GO:0006811|"GO:ion transport"|Ion transport| GO:SWS GO:0016020|"GO:membrane"|Membrane| GO:SWS GO:0000166|"GO:nucleotide binding"|Nucleotide-binding| GO:SWS GO:0006810|"GO:transport"|Transport| PROS 366->375|PS00152|ATPASE_ALPHA_BETA|PDOC00137| SEG 405->419|afsafasdldaasla| BL:PDB:NREP 1 BL:PDB:REP 30->511|2qe7A|e-159|60.0|472/474| RP:PDB:NREP 1 RP:PDB:REP 28->513|2ck3A|e-114|50.8|486/487| RP:PFM:NREP 1 RP:PFM:REP 151->375|PF00006|4e-25|34.0|212/212|ATP-synt_ab| HM:PFM:NREP 3 HM:PFM:REP 151->375|PF00006|4.5e-68|32.1|215/215|ATP-synt_ab| HM:PFM:REP 387->486|PF00306|2.5e-22|37.0|100/113|ATP-synt_ab_C| HM:PFM:REP 28->95|PF02874|6.6e-17|36.8|68/69|ATP-synt_ab_N| GO:PFM:NREP 1 GO:PFM GO:0005524|"GO:ATP binding"|PF00006|IPR000194| RP:SCP:NREP 3 RP:SCP:REP 28->97|1bmfA2|4e-12|44.3|70/71|b.49.1.1| RP:SCP:REP 98->377|1bmfD3|8e-77|24.2|269/276|c.37.1.11| RP:SCP:REP 383->513|1bmfA1|2e-27|32.1|131/131|a.69.1.1| HM:SCP:REP 12->97|1mabA2|3.3e-26|48.8|86/86|b.49.1.1|1/1|N-terminal domain of alpha and beta subunits of F1 ATP synthase| HM:SCP:REP 98->382|1e79A3|1.7e-101|47.0|285/0|c.37.1.11|1/1|P-loop containing nucleoside triphosphate hydrolases| HM:SCP:REP 383->511|1fx0A1|5.3e-43|52.7|129/129|a.69.1.1|1/1|C-terminal domain of alpha and beta subunits of F1 ATP synthase|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m5-4543423614664422243353924556B46334544A47545444U3353399CH3963343333 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-4, 291-295, 513-545| PSIPRED cccccccHHHHHHHHHHHHHHHccccEEEEEEEEEEEEccEEEEEccccccEEEEEEEcccEEEEEEEEcccEEEEEEEccccccccccEEEEcccEEEEEccccccccEEEccccccccccccccccEEEEcccccccccccccccHHHccHHHHHHHccccccccEEEEccccccHHHHHHHHHHHHHHccccccccccEEEEEEEEcccHHHHHHHHHHHHHcccccEEEEEEEcccccHHHHHHHHHHHHHHHHHHHHccccEEEEEEcccHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHccccccccccEEEEEEEEEccccccccHHHHHHHEEEEEEEEEHHHHHccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHccc //