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Nocardia farcinica IFM 10152 (nfar0)
Gene : atpB
DDBJ      :atpB         putative ATP synthase A subunit
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  527/915 : Eukaryota  22/199 : Viruses  0/175   --->[See Alignment]
f.18.1
:283 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   114->274 1c17M PDBj 2e-07 30.2 %
:RPS:SCOP  109->274 1c17M  f.18.1.1 * 2e-22 23.2 %
:HMM:SCOP  106->275 1c17M_ f.18.1.1 * 2e-35 37.8 %
:RPS:PFM   78->274 PF00119 * ATP-synt_A 1e-18 39.4 %
:HMM:PFM   57->274 PF00119 * ATP-synt_A 1.2e-41 35.1 205/215  
:BLT:SWISS 12->283 ATP6_RHOE4 2e-97 65.4 %
:PROS 203->212|PS00449|ATPASE_A
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55904.1 GT:GENE atpB GT:PRODUCT putative ATP synthase A subunit GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 1169161..1170012 GB:FROM 1169161 GB:TO 1170012 GB:DIRECTION + GB:GENE atpB GB:PRODUCT putative ATP synthase A subunit GB:PROTEIN_ID BAD55904.1 LENGTH 283 SQ:AASEQ MSDRTAGMTEPAARTRERTLSVTTLAAGEFHAPSLTDFFPPAVLFEGTPFELDRLMLVRLLMTAVLVAVMLLAFRSPRIIPRGLQNVAEIGLVFVKEQIAEEVLGKETGRKFFPLIATIFFTVLFLNFSGIVPLLNISSNARIGMPLVLAVVAYIAFNYVGIKKYGFFTYMRSSIVVPNVPPALHVLLIPIEFVSTFILRPFTLTVRLMANMLAGHIMLVLFFSATWYFLFDATAWMKVFSPFSLLAGLGFTLFEMLVIFLQAYVFALLTAVYIGLAEHADSH GT:EXON 1|1-283:0| BL:SWS:NREP 1 BL:SWS:REP 12->283|ATP6_RHOE4|2e-97|65.4|272/275| PROS 203->212|PS00449|ATPASE_A|PDOC00420| TM:NTM 6 TM:REGION 58->80| TM:REGION 113->135| TM:REGION 140->161| TM:REGION 182->204| TM:REGION 215->237| TM:REGION 249->271| SEG 54->75|rlmlvrllmtavlvavmllafr| BL:PDB:NREP 1 BL:PDB:REP 114->274|1c17M|2e-07|30.2|129/142| RP:PFM:NREP 1 RP:PFM:REP 78->274|PF00119|1e-18|39.4|180/215|ATP-synt_A| HM:PFM:NREP 1 HM:PFM:REP 57->274|PF00119|1.2e-41|35.1|205/215|ATP-synt_A| GO:PFM:NREP 3 GO:PFM GO:0015078|"GO:hydrogen ion transmembrane transporter activity"|PF00119|IPR000568| GO:PFM GO:0015986|"GO:ATP synthesis coupled proton transport"|PF00119|IPR000568| GO:PFM GO:0045263|"GO:proton-transporting ATP synthase complex, coupling factor F(o)"|PF00119|IPR000568| RP:SCP:NREP 1 RP:SCP:REP 109->274|1c17M|2e-22|23.2|138/142|f.18.1.1| HM:SCP:REP 106->275|1c17M_|2e-35|37.8|156/171|f.18.1.1|1/1|F1F0 ATP synthase subunit A| OP:NHOMO 568 OP:NHOMOORG 549 OP:PATTERN -------------------------------------------------------------------- 1-111111111111-1111-1111-111111-1---111111111111111111111111111111211111111111111111--11111111--1--1111111-111--------------1211-1112111-----111----------------------1-----------------------1-------------------------------1-1------------------------------------------------1-1111111-111--------------------------------------1-1-------------------1-----1-----111-1111-------11-111-111111111211111111-------1--2-11111111-111111111111111111111111111111111111111--1111111111111111111111111111111111111111-----------11111----111111--1-----1---1-------11----1-----11111-11-11-111-211111-2---1---11-122111111111111111111111111111111-1111111-1-111-211111121111111111111--1-1111-11111111111111111111-1111111111111111111111--1--11111111111111111-111111111-----------1-11111111111--1111111111111111111111111111--11111111111111111111-111111111211111212111-111111111111--11111111----------------------------------------------1-- ---------------------1------------1------------------------------1----1-----1----------2-----1---11------2------111-----------------------------------------------12----------1-11------1--12-1-------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 129 STR:RPRED 45.6 SQ:SECSTR #################################################################################################################HHHHHHHHHHHHHHHHHHHHH###############HHTTcccccccHHHH###HHHHHHHHHHHHHHHHHHHHHHHHHHcccTTHHHHHHHHHHHHHHHHHHHHHHHHHHHccc#####HHH#########HHHHHHHHHHHHHHHHHHHHHHHHHHHHc######### DISOP:02AL 1-15, 275-283| PSIPRED ccccccccccccccccccHHHHHHHHccccccccHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHcccEEcccccHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccc //