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Nocardia farcinica IFM 10152 (nfar0)
Gene : atpH
DDBJ      :atpH         putative ATP synthase delta subunit
Swiss-Prot:ATPD_NOCFA   RecName: Full=ATP synthase subunit delta;AltName: Full=ATP synthase F(1) sector subunit delta;AltName: Full=F-type ATPase subunit delta;         Short=F-ATPase subunit delta;

Homologs  Archaea  0/68 : Bacteria  310/915 : Eukaryota  14/199 : Viruses  0/175   --->[See Alignment]
a.70.1
:269 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   105->197 1abvA PDBj 7e-04 12.1 %
:RPS:PDB   191->251 2c4rL PDBj 3e-04 18.6 %
:RPS:SCOP  105->197 1abvA  a.70.1.1 * 3e-04 12.1 %
:RPS:PFM   105->268 PF00213 * OSCP 2e-19 39.0 %
:HMM:PFM   27->87 PF00213 * OSCP 1.3e-05 27.9 61/172  
:HMM:PFM   105->268 PF00213 * OSCP 3.8e-37 35.4 164/172  
:BLT:SWISS 21->269 ATPD_NOCFA e-123 100.0 %
:PROS 230->249|PS00389|ATPASE_DELTA
:REPEAT 2|33->99|123->189
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55907.1 GT:GENE atpH GT:PRODUCT putative ATP synthase delta subunit GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 1170998..1171807 GB:FROM 1170998 GB:TO 1171807 GB:DIRECTION + GB:GENE atpH GB:PRODUCT putative ATP synthase delta subunit GB:PROTEIN_ID BAD55907.1 LENGTH 269 SQ:AASEQ MYAASREASSRSREALRAALTGSDSVAATTGSELFAVVAVLDDQRSLRVALADVSVPGSARAELSERVFGGKVSVATQAVLTTAVAQNWSRTSDMVDTLVLLGQEALLESAANAGRLDAVEDELFRLGRIIADNADLEQALSDRAKPAAAKRELIARLLAGKAEPVTISLAEQVVGRNTTRIGAAFDELSDLAAARRDQIVAHVRAAIALTSQQRERLAASLQRIYGKPVTVHVQVDPSLLSGLVVRIGDDVIDGSAVGRLERLRRELA GT:EXON 1|1-269:0| SW:ID ATPD_NOCFA SW:DE RecName: Full=ATP synthase subunit delta;AltName: Full=ATP synthase F(1) sector subunit delta;AltName: Full=F-type ATPase subunit delta; Short=F-ATPase subunit delta; SW:GN Name=atpH; OrderedLocusNames=NFA_10620; SW:KW ATP synthesis; Cell membrane; CF(1); Complete proteome;Hydrogen ion transport; Ion transport; Membrane; Transport. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 21->269|ATPD_NOCFA|e-123|100.0|249/269| GO:SWS:NREP 7 GO:SWS GO:0006754|"GO:ATP biosynthetic process"|ATP synthesis| GO:SWS GO:0005886|"GO:plasma membrane"|Cell membrane| GO:SWS GO:0045261|"GO:proton-transporting ATP synthase complex, catalytic core F(1)"|CF(1)| GO:SWS GO:0015992|"GO:proton transport"|Hydrogen ion transport| GO:SWS GO:0006811|"GO:ion transport"|Ion transport| GO:SWS GO:0016020|"GO:membrane"|Membrane| GO:SWS GO:0006810|"GO:transport"|Transport| PROS 230->249|PS00389|ATPASE_DELTA|PDOC00327| NREPEAT 1 REPEAT 2|33->99|123->189| SEG 3->20|aasreassrsrealraal| SEG 73->86|vsvatqavlttava| RP:PDB:NREP 2 RP:PDB:REP 105->197|1abvA|7e-04|12.1|91/105| RP:PDB:REP 191->251|2c4rL|3e-04|18.6|59/491| RP:PFM:NREP 1 RP:PFM:REP 105->268|PF00213|2e-19|39.0|164/171|OSCP| HM:PFM:NREP 2 HM:PFM:REP 27->87|PF00213|1.3e-05|27.9|61/172|OSCP| HM:PFM:REP 105->268|PF00213|3.8e-37|35.4|164/172|OSCP| GO:PFM:NREP 4 GO:PFM GO:0005886|"GO:plasma membrane"|PF00213|IPR000711| GO:PFM GO:0015986|"GO:ATP synthesis coupled proton transport"|PF00213|IPR000711| GO:PFM GO:0045261|"GO:proton-transporting ATP synthase complex, catalytic core F(1)"|PF00213|IPR000711| GO:PFM GO:0046933|"GO:hydrogen ion transporting ATP synthase activity, rotational mechanism"|PF00213|IPR000711| RP:SCP:NREP 1 RP:SCP:REP 105->197|1abvA|3e-04|12.1|91/105|a.70.1.1| OP:NHOMO 326 OP:NHOMOORG 324 OP:PATTERN -------------------------------------------------------------------- --11111111111111111-11111111111111111111111111111111-111-1--111111111111111111----1-------------------1-1---1----------------111--111--111111111-1-------11111111-1--11-------1-11--111----------1---------------11---1---11-1---------------------------------1----1--1--11--------------------------------------------------------1--1--------------1111-----1-11111-111--1--------1-1-111-1-----111111-11-111111111111----------11-11111111111111-1----1-11111111111111--111--------------------------------111-------------------------------1111--111--------------1---11--------------1--------------1--111--11111--------------------------------1-------1---------------------------------111---1111111-11-1111111111111111111---11--1111111111111111111111111--111111111111---1-----------1-----------------1111111111----------------------------1----------------1-1--11-------1-------------------------------------------------------- --------------1------------------------------------1-1--------------------------------------------------------2--1--------1--1-----------------1---------21---------------------1-1----1---------1----- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 143 STR:RPRED 53.2 SQ:SECSTR ########################################################################################################HHHHHHHHHTTcHHHHHHHHHHHHHHHTcH#HHHHHHTccccHHHHHHHHH#HHHcccccHHHHHHHHHHHHTTGGGHHHHHHHHHHTTcccEEEEEEEEEHHHHHHTTTHHHHHHHHHHTTTcEEE##EEEEccccTTEEEEEETT################## DISOP:02AL 1-10, 52-66| PSIPRED cccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHccccEEEEEEEccccccHHHHHHHHHHHcccccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHccHHHHHHHccccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHccEEEEEEEEEEcccHHHHHHHHHHHHHHHccEEEEEEEEcHHHHcEEEEEEccEEEEHHHHHHHHHHHHHcc //