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Nocardia farcinica IFM 10152 (nfar0)
Gene : bioB
DDBJ      :bioB         putative biotin synthase
Swiss-Prot:BIOB_NOCFA   RecName: Full=Biotin synthase;         EC=2.8.1.6;AltName: Full=Biotin synthetase;

Homologs  Archaea  14/68 : Bacteria  673/915 : Eukaryota  112/199 : Viruses  0/175   --->[See Alignment]
c.1.28
:337 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   59->326 1r30B PDBj 2e-48 36.5 %
:RPS:PDB   52->333 1alaA PDBj 6e-38 11.4 %
:RPS:SCOP  48->328 1r30A  c.1.28.1 * 4e-80 35.5 %
:HMM:SCOP  22->333 1r30A_ c.1.28.1 * 4.7e-70 32.1 %
:RPS:PFM   157->220 PF04055 * Radical_SAM 6e-04 34.4 %
:RPS:PFM   238->326 PF06968 * BATS 4e-08 34.1 %
:HMM:PFM   238->326 PF06968 * BATS 6.9e-22 41.4 87/92  
:HMM:PFM   70->226 PF04055 * Radical_SAM 1.3e-18 24.0 154/166  
:BLT:SWISS 1->337 BIOB_NOCFA 0.0 100.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56678.1 GT:GENE bioB GT:PRODUCT putative biotin synthase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 2004564..2005577 GB:FROM 2004564 GB:TO 2005577 GB:DIRECTION + GB:GENE bioB GB:PRODUCT putative biotin synthase GB:PROTEIN_ID BAD56678.1 LENGTH 337 SQ:AASEQ MTQAPVQTDILEIAREQVLERGEGLTQDQTLAVLRLGDDRLEELLGLAHEVRMKWCGPEVEVEGIISLKTGGCPEDCHFCSQSGLFQSPVRAAWLDIPSLVEAAKQTAKTGATEFCIVAAVRGPDARLMAQVAAGVEAIRNEVDIQVACSLGMLTQEQVDQLAAMGVHRYNHNLETAKSHFPNVVTTHTWEERWDTLRMVREAGMEVCCGGILGMGETLEQRAEFAAQLAELEPDEVPLNFLNPRPGTPFGDLEVLPASEALKAVAAFRLALPRTILRFAGGREITLGDLGAKQGILGGINAVIVGNYLTTLGRPAESDLDLLGELKMPIKALNETL GT:EXON 1|1-337:0| SW:ID BIOB_NOCFA SW:DE RecName: Full=Biotin synthase; EC=2.8.1.6;AltName: Full=Biotin synthetase; SW:GN Name=bioB; OrderedLocusNames=NFA_18320; SW:KW 2Fe-2S; 4Fe-4S; Biotin biosynthesis; Complete proteome; Iron;Iron-sulfur; Metal-binding; S-adenosyl-L-methionine; Transferase. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->337|BIOB_NOCFA|0.0|100.0|337/337| GO:SWS:NREP 6 GO:SWS GO:0051537|"GO:2 iron, 2 sulfur cluster binding"|2Fe-2S| GO:SWS GO:0051539|"GO:4 iron, 4 sulfur cluster binding"|4Fe-4S| GO:SWS GO:0009102|"GO:biotin biosynthetic process"|Biotin biosynthesis| GO:SWS GO:0051536|"GO:iron-sulfur cluster binding"|Iron-sulfur| GO:SWS GO:0046872|"GO:metal ion binding"|Metal-binding| GO:SWS GO:0016740|"GO:transferase activity"|Transferase| SEG 34->47|lrlgddrleellgl| BL:PDB:NREP 1 BL:PDB:REP 59->326|1r30B|2e-48|36.5|266/313| RP:PDB:NREP 1 RP:PDB:REP 52->333|1alaA|6e-38|11.4|281/316| RP:PFM:NREP 2 RP:PFM:REP 157->220|PF04055|6e-04|34.4|64/164|Radical_SAM| RP:PFM:REP 238->326|PF06968|4e-08|34.1|88/93|BATS| HM:PFM:NREP 2 HM:PFM:REP 238->326|PF06968|6.9e-22|41.4|87/92|BATS| HM:PFM:REP 70->226|PF04055|1.3e-18|24.0|154/166|Radical_SAM| GO:PFM:NREP 4 GO:PFM GO:0003824|"GO:catalytic activity"|PF04055|IPR007197| GO:PFM GO:0051536|"GO:iron-sulfur cluster binding"|PF04055|IPR007197| GO:PFM GO:0051186|"GO:cofactor metabolic process"|PF06968|IPR010722| GO:PFM GO:0051536|"GO:iron-sulfur cluster binding"|PF06968|IPR010722| RP:SCP:NREP 1 RP:SCP:REP 48->328|1r30A|4e-80|35.5|279/314|c.1.28.1| HM:SCP:REP 22->333|1r30A_|4.7e-70|32.1|308/312|c.1.28.1|1/1|Radical SAM enzymes| OP:NHOMO 845 OP:NHOMOORG 799 OP:PATTERN ------------------------1--1---1---22122222----------1------------11 ----212111111111111-111111111111111111111121---1----111111--1111111111-------------111111111-111----1111111111-------1-11111-111111111-1----------11111111-1111111111111111111111111111---11---111111111111111111-111111111111---------111111111111111111111---------------------------1111----------------------------------------21-221111111111-111111--11---1211--222---1-2122-111111111-----111111111111111111111111-11111111-3111111--1-----11111--21-11--111111111111111--1111111111--------1-----------11111111111111112111111111111111111111-11111111111211-11111111-1121111111111-12111111111111111111111111111121111111111111111111111111111111111111111111111111111111111--111111-11111111111111111111-11111111111111111111111111111111111111111111111111111111111111111--111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111---------------------------------------1--11121-1 ------------1111111111111-11111-111111111111111111111111-11111111-11---1111111111111-111-12111111111111111-11----------------------------------------------------------------1-111181111121231111121122 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 287 STR:RPRED 85.2 SQ:SECSTR ###############################################HHHHcTTccHHHHHHHHHHHHccccccHHHHHHHccHHHHHHHHHHHHHHHccHHHHHHHHccHHHHHHHHHHHccTTTHHHHHHHHHHccccccHHHHHHHEHHHccHHHHHHHHHHHHHHHcccHHccHHHHHHHHHHHTccccccccccHHHHHHHHHHHHHHHHTTTcccHHHHHHHHHHccHHHHHHHHHHHHHcccGGGGcccccccHHHHHHHHHHHHHHcHHHHHHHHHHHHccHHHHHHHHHHTTTTHHHHHHHHHcccHHHHHHccHHHHHHHHHHc### DISOP:02AL 1-5, 336-337| PSIPRED cccccccHHHHHHHHHHHHHccccccHHHHHHHHccccccHHHHHHHHHHHHHHHcccEEEEEEEEEEEcccccccccccccccccccccccccccHHHHHHHHHHHHHccccEEEEEEccccccHHHHHHHHHHHHHHHHHcccEEEEccccccHHHHHHHHHcccEEEEEEccccHHHHHHHcccccHHHHHHHHHHHHHccccEEccEEEcccccHHHHHHHHHHHHHccccEEEEEEEEccccccccccccccHHHHHHHHHHHHHHcccccEEEEccccccccHHHHHHHHHHcccEEEEccEEccccccHHHHHHHHHHHcccHHHHcccc //