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Nocardia farcinica IFM 10152 (nfar0)
Gene : bioD
DDBJ      :bioD         putative dethiobiotin synthetase
Swiss-Prot:BIOD_NOCFA   RecName: Full=Dethiobiotin synthetase;         EC=6.3.3.3;AltName: Full=Dethiobiotin synthase;AltName: Full=DTB synthetase;         Short=DTBS;

Homologs  Archaea  2/68 : Bacteria  87/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.37.1
:243 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   33->59,142->186 3fgnD PDBj 4e-10 55.6 %
:RPS:PDB   3->165 1daeA PDBj 5e-06 24.5 %
:HMM:SCOP  1->212 1byiA_ c.37.1.10 * 3.7e-34 38.6 %
:HMM:PFM   5->144 PF01656 * CbiA 1.1e-07 20.4 113/194  
:BLT:SWISS 1->243 BIOD_NOCFA e-114 100.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56666.1 GT:GENE bioD GT:PRODUCT putative dethiobiotin synthetase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 1987153..1987884 GB:FROM 1987153 GB:TO 1987884 GB:DIRECTION + GB:GENE bioD GB:PRODUCT putative dethiobiotin synthetase GB:PROTEIN_ID BAD56666.1 LENGTH 243 SQ:AASEQ MNTLLVTGTSTDVGKTVVTAALTALARAEALPVAVCKPAQTGVAPGEPGDLAEVRRLAGPVPTLELARYPEPLAPDTAARRCGAPLLTLDETATAVRGLDAELTVVEGAGGLLVRIGEFTLLDLARELDAPVLVVAAAGLGTLNHTELTIRALDAAGVRCAGVVIGAWPAEPDLASVCNREDLPRLTGVPIVGAVPAGVGAWDHDRFTAAVPGWFAPGWSPRLPFNSDSPPSTWGFDTSQSGT GT:EXON 1|1-243:0| SW:ID BIOD_NOCFA SW:DE RecName: Full=Dethiobiotin synthetase; EC=6.3.3.3;AltName: Full=Dethiobiotin synthase;AltName: Full=DTB synthetase; Short=DTBS; SW:GN Name=bioD; OrderedLocusNames=NFA_18200; SW:KW ATP-binding; Biotin biosynthesis; Complete proteome; Ligase;Magnesium; Nucleotide-binding. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->243|BIOD_NOCFA|e-114|100.0|243/243| GO:SWS:NREP 4 GO:SWS GO:0005524|"GO:ATP binding"|ATP-binding| GO:SWS GO:0009102|"GO:biotin biosynthetic process"|Biotin biosynthesis| GO:SWS GO:0016874|"GO:ligase activity"|Ligase| GO:SWS GO:0000166|"GO:nucleotide binding"|Nucleotide-binding| SEG 16->31|tvvtaaltalaraeal| SEG 132->141|vlvvaaaglg| SEG 188->201|gvpivgavpagvga| BL:PDB:NREP 1 BL:PDB:REP 33->59,142->186|3fgnD|4e-10|55.6|71/224| RP:PDB:NREP 1 RP:PDB:REP 3->165|1daeA|5e-06|24.5|163/219| HM:PFM:NREP 1 HM:PFM:REP 5->144|PF01656|1.1e-07|20.4|113/194|CbiA| HM:SCP:REP 1->212|1byiA_|3.7e-34|38.6|210/224|c.37.1.10|1/1|P-loop containing nucleoside triphosphate hydrolases| OP:NHOMO 89 OP:NHOMOORG 89 OP:PATTERN ---------------------------1---1------------------------------------ ----1-11111-1-1------11111-----1111111111-11--------1--------11111-111---------------111-------------------------------------------------------------------------------------------------------1-1111111111111111-----1111--------------1--------------------------------------------------------------------------------------------------------------------------------------------1-----1----------------------------------------------------------1----------11111111-11---------------------------------------1-111---------------------------------------1---------------------1-----------1-------11-11---11------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-------------------------1----------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 184 STR:RPRED 75.7 SQ:SECSTR ##EEEEEEccTTccHHHHHHHHHHHHHHTTccEEEEccEEEccEEEEcHHHHHHHHHccccccHHHEEEcccccHHHHHHHHTccccHHHHHHHHHHHTTccEEEEEccccTccccccccHHHHHHHHTccEEEEEEccTTHHHHHHHHHHHHHHTTccEEEEEEEEEcccccHHHHHHHHHHHTT######################################################### DISOP:02AL 238-243| PSIPRED ccEEEEEEcccccHHHHHHHHHHHHHHHcccEEEEEccHHccccccccccHHHHHHHHcccccccHHHccccccHHHHHHHHcccHHHHHHHHHHHHHccccEEEEEcccccccccccHHHHHHHHHHcccEEEEEcccccHHHHHHHHHHHHHHccccEEEEEEEcccccHHHHHHHHHHHHHHHccccEEEEEccccccccHHHHHHHccHHHccccHHccHHHHcccHHHcccccccccc //