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Nocardia farcinica IFM 10152 (nfar0)
Gene : bioF
DDBJ      :bioF         putative 8-amino-7-oxononanoate synthase
Swiss-Prot:             

Homologs  Archaea  23/68 : Bacteria  669/915 : Eukaryota  188/199 : Viruses  1/175   --->[See Alignment]
c.67.1
:384 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   3->346 2w8jA PDBj 3e-34 30.7 %
:RPS:PDB   18->376 3a2bA PDBj 5e-61 24.0 %
:RPS:SCOP  35->347 1bs0A  c.67.1.4 * 5e-54 30.7 %
:HMM:SCOP  2->380 1fc4A_ c.67.1.4 * 1.2e-89 41.5 %
:HMM:PFM   35->367 PF00155 * Aminotran_1_2 2.4e-55 27.3 326/363  
:BLT:SWISS 5->347 BIKB_MYCPA 1e-92 63.2 %
:PROS 229->238|PS00599|AA_TRANSFER_CLASS_2
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56665.1 GT:GENE bioF GT:PRODUCT putative 8-amino-7-oxononanoate synthase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 1986002..1987156 GB:FROM 1986002 GB:TO 1987156 GB:DIRECTION + GB:GENE bioF GB:PRODUCT putative 8-amino-7-oxononanoate synthase GB:PROTEIN_ID BAD56665.1 LENGTH 384 SQ:AASEQ MTTDPLSWLDERADARVSAGLRRELRPRAPRSPSIDLASNDYLGLTRHPEVVEGAVAAVRRWGAGSTGSRLVTGTTTEHEQLEAELADFVGAEAGLVFASGYAANLGAVTALAGRGSLVVSDAGSHASLVDACRLSRARVEITPHRDVAAVDRVLAARTEERALVLTDSVFSADGDLAPLADLHRVTRANGAVLVVDEAHGLGVRGTGGRGLVHETGLAGEPDLVVTATLSKALAAQGGAVLCSERVRAHLIDTARTFIFDTGLAPAAVGAARAALALLRRDPGMAGRVLSNAAAIARIAGVGTPESAVVSVVLGQAQVAHDAAQACRARGLEVGCFRPPSVPEGTSRLRLTARADLTAADLDTIATVLGEVLAEARGREVVPA GT:EXON 1|1-384:0| BL:SWS:NREP 1 BL:SWS:REP 5->347|BIKB_MYCPA|1e-92|63.2|342/381| PROS 229->238|PS00599|AA_TRANSFER_CLASS_2|PDOC00518| SEG 50->65|evvegavaavrrwgag| SEG 146->158|rdvaavdrvlaar| SEG 200->214|hglgvrgtggrglvh| SEG 264->281|lapaavgaaraalallrr| SEG 348->364|rlrltaradltaadldt| BL:PDB:NREP 1 BL:PDB:REP 3->346|2w8jA|3e-34|30.7|335/398| RP:PDB:NREP 1 RP:PDB:REP 18->376|3a2bA|5e-61|24.0|358/392| HM:PFM:NREP 1 HM:PFM:REP 35->367|PF00155|2.4e-55|27.3|326/363|Aminotran_1_2| RP:SCP:NREP 1 RP:SCP:REP 35->347|1bs0A|5e-54|30.7|309/383|c.67.1.4| HM:SCP:REP 2->380|1fc4A_|1.2e-89|41.5|378/0|c.67.1.4|1/1|PLP-dependent transferases| OP:NHOMO 2041 OP:NHOMOORG 881 OP:PATTERN --1---------------------1--1---1----1111111-----------1111111-111-11 112-1-1-----1-11122-211131222223111111131111-111----2111-2--2222315343-------------111114434-433---22333342325-------21222221222332223131-------1-2111111--111111112111111211111111111111111112112222222222222222-1221222211-1111------2112222222222222211111-----------------1----------------------------------------------------111----------------------1--1---1-------1--111111-2225334-----452442223343322222222222-44546444272222223243223323233322323352333333333244332322232222222--11111111111111111-23333121132333324333333223333234233232112321111-123-1-1112111311111111322111--11112-222---1212211112222243221--1-1--111111--111-1-111222212112222222222222222222222221--1111-1----22222222223233333-23233333332333223322222222222222222222222223222222211222222222222--1222222333311412111-1-111111--1-111111111211111111111121111132222222212223333333332222222222221111111-111111--------1------------------1--------11111-1---132 11--223-522-334343234444756223333423333322333322233343332121113-112--11112121-22-2221133-3A544336332344653-42298A7568412244363582EU915672322845561534355393545468845542223H34534122L3233548C52531297763 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-- STR:NPRED 381 STR:RPRED 99.2 SQ:SECSTR ccHcHHHHHHHHHHHHHHTTccccccccccccccEEcccccTTcGGGcHHHHHHHHHHHHHHcccccccTTTTcccHHHHHHHHHHHHHHTccEEEEEccHHHHHHHHHHHcccTTcEEEEETTccHHHHHHHHHcccEEEEEcTTcHHHHHHHHHTccccccEEEEEcccTTTcccccHHHHHHHHHHHTcEEEEEcTTTTTTccGGGccHHHHHTcGGGcccEEEEEcccTTccccEEEEEcHHHHHHHHHHcHHHHccccccHHHHHHHHHHHHHHHHcTHHHHHHHHHHHHHHTTcccccccccEEEEEcccHHHHHHHHHHHHHTTEEcEEEcTTTccGGGcEEEEEccTTccHHHHHHHHHHHHHHHHHcHHHcc### DISOP:02AL 381-384| PSIPRED ccccHHHHHHHHHHHHHHccccEEEEEEEcccEEEEEEccccccccccHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHcccEEEEEccHHHHHHHHHHHHcccccEEEEcccHHHHHHHHHHHcccEEEEEccccHHHHHHHHHHcccccEEEEEEcccccccccccHHHHHHHHHHcccEEEEEcccccccccccccccHHHcccccccEEEEEEccHHHHHccccEEEcHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHcccccccccEEEEEEccHHHHHHHHHHHHHcccEEEEEEcccccccccEEEEEccccccHHHHHHHHHHHHHHHHHHHccccccc //