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Nocardia farcinica IFM 10152 (nfar0)
Gene : clp4
DDBJ      :clp4         putative Clp protease proteolytic subunit
Swiss-Prot:CLPP1_NOCFA  RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;         EC=3.4.21.92;AltName: Full=Endopeptidase Clp 1;

Homologs  Archaea  0/68 : Bacteria  883/915 : Eukaryota  146/199 : Viruses  0/175   --->[See Alignment]
c.14.1
:197 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   6->196 1yg6B PDBj 4e-38 38.9 %
:RPS:PDB   22->194 2cbyB PDBj 7e-43 35.6 %
:RPS:SCOP  14->196 1tg6A1  c.14.1.1 * 1e-22 36.6 %
:HMM:SCOP  13->196 2f6iA1 c.14.1.1 * 6.7e-59 44.8 %
:RPS:PFM   17->193 PF00574 * CLP_protease 3e-41 42.9 %
:HMM:PFM   16->195 PF00574 * CLP_protease 4.4e-65 45.6 180/182  
:BLT:SWISS 1->197 CLPP1_NOCFA 6e-99 100.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56017.1 GT:GENE clp4 GT:PRODUCT putative Clp protease proteolytic subunit GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 1299282..1299875 GB:FROM 1299282 GB:TO 1299875 GB:DIRECTION + GB:GENE clp4 GB:PRODUCT putative Clp protease proteolytic subunit GB:PROTEIN_ID BAD56017.1 LENGTH 197 SQ:AASEQ MSTYTIPNVIAQHPRGGERITDIYSHLLAERIVYLGTPIDSGVANALIAQLLHLESESPDQEINFYINCEGGDLPSMLAVYDTMQHIGAPVHTTCVGQAIAVGAVLLAGGAPGQRAMLPHARVVLHQPAARGQGPIPDLILQADELVRMRSEIEAILSRHTGRSPEQLREDTDRDRVFTATAALEYGLIDTVLSPRG GT:EXON 1|1-197:0| SW:ID CLPP1_NOCFA SW:DE RecName: Full=ATP-dependent Clp protease proteolytic subunit 1; EC=3.4.21.92;AltName: Full=Endopeptidase Clp 1; SW:GN Name=clpP1; OrderedLocusNames=NFA_11720; SW:KW ATP-binding; Complete proteome; Cytoplasm; Hydrolase;Nucleotide-binding; Protease; Serine protease. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->197|CLPP1_NOCFA|6e-99|100.0|197/197| GO:SWS:NREP 6 GO:SWS GO:0005524|"GO:ATP binding"|ATP-binding| GO:SWS GO:0005737|"GO:cytoplasm"|Cytoplasm| GO:SWS GO:0016787|"GO:hydrolase activity"|Hydrolase| GO:SWS GO:0000166|"GO:nucleotide binding"|Nucleotide-binding| GO:SWS GO:0008233|"GO:peptidase activity"|Protease| GO:SWS GO:0008236|"GO:serine-type peptidase activity"|Serine protease| SEG 96->114|vgqaiavgavllaggapgq| BL:PDB:NREP 1 BL:PDB:REP 6->196|1yg6B|4e-38|38.9|190/192| RP:PDB:NREP 1 RP:PDB:REP 22->194|2cbyB|7e-43|35.6|163/170| RP:PFM:NREP 1 RP:PFM:REP 17->193|PF00574|3e-41|42.9|177/179|CLP_protease| HM:PFM:NREP 1 HM:PFM:REP 16->195|PF00574|4.4e-65|45.6|180/182|CLP_protease| GO:PFM:NREP 2 GO:PFM GO:0004252|"GO:serine-type endopeptidase activity"|PF00574|IPR001907| GO:PFM GO:0006508|"GO:proteolysis"|PF00574|IPR001907| RP:SCP:NREP 1 RP:SCP:REP 14->196|1tg6A1|1e-22|36.6|183/184|c.14.1.1| HM:SCP:REP 13->196|2f6iA1|6.7e-59|44.8|183/0|c.14.1.1|1/1|ClpP/crotonase| OP:NHOMO 1679 OP:NHOMOORG 1029 OP:PATTERN -------------------------------------------------------------------- 1112422222222222222-222222222222222244442445442222222222242233423225532222222211121111111111111111-11112211122222222222222222111111111112222211111344344433444444444432444444444444444411111111211222222222233222222211222111111122222233211111111111111111111111111111111111111111111111111111111111111111111111111111111-1111111111112111111112112111111211112111122111111111111111112111211111112211111111111111111112-1121111122213332332333331122111211111112222222222221121111111111111111111111111111111111111111211111111111112211111121211111111111111211121111111111111111111111111111111111111111111111111112211111111111111111111111111111111111111111111111111111111111111111111111111111221111111111--1111111111111111111111111111111111111111112111111111111111111111111111111111121211111111111111111111111111111222211111111111111111111111111111111111111211111111111111112222222222222222--------------------------1111111111121 22----121---1111111111111111111111111111111-11111111111111111-1----------1---------------1211111111111-111-1C-21111211-1--111-11-151-11111--11111-1--11-1-1--111111111-111512225766*78979JBJI19C6631116 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 197 STR:RPRED 100.0 SQ:SECSTR TTEEcEEETTTccccccccccHHHHHHHHTTEEEEcccccHHHHHHHHHHHHHHHHHcTTccEEEEEEEccccHHHHHHHHHHHHHccccEEEEEEEEEETHHHHHHHTccTTcEEEcTTcEEEcccccHHccTTccccHHHHHHHHHHHHHHHHHHHHHHTccHHHHHHHHHTTcEEEHHHHHHHTcccEEccccH DISOP:02AL 1-3| PSIPRED ccccccccccEEcccccccHHHHHHHHHcccEEEEEccccHHHHHHHHHHHHHHHHccccccEEEEEEcccccccHHHHHHHHHHHccccEEEEEEccHHHHHHHHHHccccccEEEccccEEEEEccccccEEcHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHcccccccHHHHHHcccccccccccc //