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Nocardia farcinica IFM 10152 (nfar0)
Gene : cobS
DDBJ      :cobS         putative cobalamin 5'-phosphate synthase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  14/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
:259 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   86->244 PF02654 * CobS 2e-06 26.6 %
:HMM:PFM   15->253 PF02654 * CobS 1.5e-46 36.2 232/235  
:BLT:SWISS 12->112 COBS_COREF 6e-09 62.4 %
:BLT:SWISS 85->244 COBS_MYCTU 4e-17 40.9 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56545.1 GT:GENE cobS GT:PRODUCT putative cobalamin 5'-phosphate synthase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(1850966..1851745) GB:FROM 1850966 GB:TO 1851745 GB:DIRECTION - GB:GENE cobS GB:PRODUCT putative cobalamin 5'-phosphate synthase GB:PROTEIN_ID BAD56545.1 LENGTH 259 SQ:AASEQ MTAPGRRVSWPDGLRLAFSWLTVLPVRGPEEVDRAGAARAIALAPVVGVVLGAAAAGLTWSLVAAGLSTGLAALLAVGALAVAARGMHLDGLADTADGLGSYGPPERARQIMKGGDVGPFGVAAIVFAVGVPALAFGTAAAEGRWLAIGLAVALGRVVVVLACRRAPAAPGTGFGSLVAATQHPATGVVWTILAAVCAVFAVPGRAWLGPLVVLVAVAAALLLVRHCVRRFEGLSGDVLGAAIETTVAVAAVGFSMVTH GT:EXON 1|1-259:0| BL:SWS:NREP 2 BL:SWS:REP 12->112|COBS_COREF|6e-09|62.4|101/275| BL:SWS:REP 85->244|COBS_MYCTU|4e-17|40.9|159/249| TM:NTM 7 TM:REGION 35->57| TM:REGION 63->85| TM:REGION 115->137| TM:REGION 143->163| TM:REGION 183->205| TM:REGION 207->228| TM:REGION 235->257| SEG 35->58|agaaraialapvvgvvlgaaaagl| SEG 62->84|lvaaglstglaallavgalavaa| SEG 117->133|vgpfgvaaivfavgvpa| SEG 146->170|laiglavalgrvvvvlacrrapaap| SEG 211->224|lvvlvavaaalllv| SEG 247->252|vavaav| RP:PFM:NREP 1 RP:PFM:REP 86->244|PF02654|2e-06|26.6|158/237|CobS| HM:PFM:NREP 1 HM:PFM:REP 15->253|PF02654|1.5e-46|36.2|232/235|CobS| GO:PFM:NREP 2 GO:PFM GO:0008818|"GO:cobalamin 5'-phosphate synthase activity"|PF02654|IPR003805| GO:PFM GO:0009236|"GO:cobalamin biosynthetic process"|PF02654|IPR003805| OP:NHOMO 14 OP:NHOMOORG 14 OP:PATTERN -------------------------------------------------------------------- --------------1--11-1-----11111-----1111------------------------1---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-9, 171-179| PSIPRED ccccccccccHHHHHHHHHHHHHccccccccccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHc //