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Nocardia farcinica IFM 10152 (nfar0)
Gene : crtB1
DDBJ      :crtB1        putative phytoene synthase
Swiss-Prot:             

Homologs  Archaea  8/68 : Bacteria  137/915 : Eukaryota  19/199 : Viruses  0/175   --->[See Alignment]
a.128.1
:394 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   179->363 2zy1A PDBj 8e-07 23.4 %
:RPS:PDB   177->359 2e8vA PDBj 5e-14 8.5 %
:RPS:SCOP  17->55,177->360 1ezfA  a.128.1.2 * 3e-23 13.7 %
:HMM:SCOP  16->389 1ezfA_ a.128.1.2 * 4.8e-67 37.0 %
:RPS:PFM   28->55,179->363 PF00494 * SQS_PSY 6e-21 42.6 %
:HMM:PFM   27->376 PF00494 * SQS_PSY 3.4e-62 39.5 261/267  
:BLT:SWISS 14->55,179->363 CRTB_STRGR 1e-36 57.2 %
:PROS 227->242|PS01044|SQUALEN_PHYTOEN_SYN_1
:PROS 259->284|PS01045|SQUALEN_PHYTOEN_SYN_2
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56581.1 GT:GENE crtB1 GT:PRODUCT putative phytoene synthase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(1886278..1887462) GB:FROM 1886278 GB:TO 1887462 GB:DIRECTION - GB:GENE crtB1 GB:PRODUCT putative phytoene synthase GB:PROTEIN_ID BAD56581.1 LENGTH 394 SQ:AASEQ MSGTRPVGPAPADLAPAYRTCRRIAADHGRTYFLATRLLTPAQRPAVHALYAFARLVDDIVDVPGPAGGGDPVAALDVVEDRLRAALAAPARPEVPVATAAPAAPITSADPPGRQSSTAAGRAGAAPLAPAGTDVPRPADGSTTPGAPFPAAAEHDRTHADRPARAALDPRLPAEWPHVLAALADTVARYAIAPQHFWTFLDSMRMDVPGSPTFRARYADMAELREYMRGSAAAIGLQMVPVLGTVGPRAAAEPAAAALGEAFQLTNFLRDVAEDLDRGRVYLPAAELAAFGVTDELLGHCRATGHTDPRVRRALAHLIAVNRDLYRRAAPGVDLLTPRVRPAIRTASALYAAILDRIEDSGYAVFTARAVVPRRRRAAVAAREFAAGILGLGR GT:EXON 1|1-394:0| BL:SWS:NREP 1 BL:SWS:REP 14->55,179->363|CRTB_STRGR|1e-36|57.2|222/342| PROS 227->242|PS01044|SQUALEN_PHYTOEN_SYN_1|PDOC00802| PROS 259->284|PS01045|SQUALEN_PHYTOEN_SYN_2|PDOC00802| SEG 57->79|vddivdvpgpagggdpvaaldvv| SEG 85->112|aalaaparpevpvataapaapitsadpp| SEG 119->132|aagragaaplapag| SEG 160->174|adrparaaldprlpa| SEG 247->262|gpraaaepaaaalgea| SEG 364->387|avftaravvprrrraavaarefaa| BL:PDB:NREP 1 BL:PDB:REP 179->363|2zy1A|8e-07|23.4|175/279| RP:PDB:NREP 1 RP:PDB:REP 177->359|2e8vA|5e-14|8.5|164/292| RP:PFM:NREP 1 RP:PFM:REP 28->55,179->363|PF00494|6e-21|42.6|204/257|SQS_PSY| HM:PFM:NREP 1 HM:PFM:REP 27->376|PF00494|3.4e-62|39.5|261/267|SQS_PSY| GO:PFM:NREP 2 GO:PFM GO:0009058|"GO:biosynthetic process"|PF00494|IPR002060| GO:PFM GO:0016740|"GO:transferase activity"|PF00494|IPR002060| RP:SCP:NREP 1 RP:SCP:REP 17->55,177->360|1ezfA|3e-23|13.7|214/323|a.128.1.2| HM:SCP:REP 16->389|1ezfA_|4.8e-67|37.0|281/0|a.128.1.2|1/1|Terpenoid synthases| OP:NHOMO 223 OP:NHOMOORG 164 OP:PATTERN ------------------------122111-1--1--------------------------------- 2-21-----------11----1--11-----111112111-1121-----------1---11--1231241---------1-1------------------------------------------11-1111111111111---1111-11111111-1111111111111-1111111-1-111111---21------------------------------11-----------------------1----------------------------------------------------------------------------------------------------------------------------1-11--------1---1---12111-------------------1----------------------1-------------------1--11-----------------------------------21122-------------1---------1----------1-------11111-111--2232212--121---------------------------1-1-----------------------------------------------------------------11-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1112I211113357-1111----1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 189 STR:RPRED 48.0 SQ:SECSTR ##############################################################################################################################################################################HccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcTTcHTTTcccccHHHHHHHHHHHTHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHTHHHHTTcccHHHHHHHHHHHHTTHHHHHHHHHTTcHHHHHHHHHHHHHTcccHHHHHHHHHHHHHHTccHHHHHHHHHHHHHHHHHcccc############################### DISOP:02AL 1-8, 103-119| PSIPRED cccccccccccccHHHHHHHHHHHHHHHccHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccHHHcccHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHcccHHccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEccHHHHHHccccHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHcHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHccccc //