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Nocardia farcinica IFM 10152 (nfar0)
Gene : crtI1
DDBJ      :crtI1        putative phytoene desaturase
Swiss-Prot:             

Homologs  Archaea  8/68 : Bacteria  122/915 : Eukaryota  36/199 : Viruses  0/175   --->[See Alignment]
c.3.1
:526 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   33->260 2e1mA PDBj 3e-13 17.3 %
:RPS:SCOP  8->65 2dw4A2  c.3.1.2 * 1e-06 34.5 %
:HMM:SCOP  1->510 1sezA1 c.3.1.2 * 5.4e-44 31.3 %
:HMM:PFM   18->503 PF01593 * Amino_oxidase 2.6e-34 23.5 425/449  
:BLT:SWISS 1->524 CRTI_STRGR 1e-80 44.3 %
:PROS 475->495|PS00982|PHYTOENE_DH
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56583.1 GT:GENE crtI1 GT:PRODUCT putative phytoene desaturase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(1889218..1890798) GB:FROM 1889218 GB:TO 1890798 GB:DIRECTION - GB:GENE crtI1 GB:PRODUCT putative phytoene desaturase GB:PROTEIN_ID BAD56583.1 LENGTH 526 SQ:AASEQ MKTVAGPTDRVVVIGAGLAGLAAALYLTGAGRQVTLLERADHPGGRVGRYRGPDYEIDSGATVLTLPEVVADALAAVGHTVDSAPVPLDILAMAPSYHARFADGSDIRVFADPDRMAAEVARTCGPAEASRYRELRRWLARIYRAEFGEFMDTNFDSPLDMVRLPAKRAALLDLIRLGGFGKLGPKVGTLLTDARLARLFTFQALYAGMSPADALAVYGAIPHMDTSLGVYFPRGGMRAIAETMASAFTAAGGTLRLGTEAAGIDYRGRRARRVRLAGGGSVPCDAVVLTADLGSLERFGGRRRRGLRASPSAVVAHGTVPAAVAARWPVQAHHTIEFGAAWEQTFREIAARRGGRLMSDPSLLLTRPALTDPALFVDRADGRHEPFSLLAPCPNLAAAPLDWDRLGRPYLRELLTVLEGRGYRGIAEHFTVDHLDTPATWRDQGMLDGSPFSAAHLFRQTGPFRTRNFPAFADNVVLAGCGTTPGVGVPTVVLSGKLAANRITGARGHLVGETARTSPLTSTATH GT:EXON 1|1-526:0| BL:SWS:NREP 1 BL:SWS:REP 1->524|CRTI_STRGR|1e-80|44.3|503/507| PROS 475->495|PS00982|PHYTOENE_DH|PDOC00755| SEG 15->31|gaglaglaaalyltgag| SEG 261->280|aagidyrgrrarrvrlaggg| SEG 293->308|lgslerfggrrrrglr| SEG 389->401|llapcpnlaaapl| SEG 482->493|gttpgvgvptvv| RP:PDB:NREP 1 RP:PDB:REP 33->260|2e1mA|3e-13|17.3|225/356| HM:PFM:NREP 1 HM:PFM:REP 18->503|PF01593|2.6e-34|23.5|425/449|Amino_oxidase| RP:SCP:NREP 1 RP:SCP:REP 8->65|2dw4A2|1e-06|34.5|58/425|c.3.1.2| HM:SCP:REP 1->510|1sezA1|5.4e-44|31.3|335/374|c.3.1.2|1/1|FAD/NAD(P)-binding domain| OP:NHOMO 235 OP:NHOMOORG 166 OP:PATTERN ------------------------11111-11--------------1--------------------- 2--1-11-11-111-11----1--11------11112111-12221---11----11---21--2111131---------1-1----------------------1-11-------------------------1-33333---21--------------------1------------------111---13-----------------------------244-1111----11111111111111----------------11-------1--------------------------------------------------------------------------------1-------1----------1-21---------1-32---22222------------32433-44-----------------1---12--1--2----------------22------------------------------11-1------------------------------------------------------------------------1---------------------------32----------------------------------------------------------------2--------1-----------------------------------------1-------------------------------------------------------------------------------------------------1----------------------1--------------------------------------1-------------------------------------- ---------------1111----111-------1-1----------11--111111---111------------------------------1------111-111---1--------------------------------------------------------------------181111-----1--------1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 472 STR:RPRED 89.7 SQ:SECSTR ###############################cEEEEEcccccccTTccEEcccTTcccccccTTccEEcccccEETTcHHHccTTcccccccccccEEEcccTTcEEEcccccTTccccccccccEEEETTEEEEHHHHHHcTHHHGGccHHHHHHHHHHHHHHHHEEEETTTEEEEccHHHHHHHHHHHHHHHTTccHHHHHHHTccccHHHHHHHHHHTTcTTTTTcEEEETTcTTHHHHHHHHHGcGGGGTEEccEEEEEEEEETTTEEEEEEccccEEEEEEEEEcccHHHHHGGGccccccTTccEEEccccHHHHHHGGGcccccccEEEEcccccHHHHHHHHHccHHHHHcccccTTcccEEEEEHHHcHHcccEEEEEEccTHHHHHHHTTTcHHHHHHHHHHHHHHHHHHTTccccEEccccccccEEEETTTcTTTcccEEEccTTccTHHHHHHHHHTcccccEEEccGccTTTTcHHHHHHHHHHHHHHH####################### DISOP:02AL 1-6, 509-526| PSIPRED cccccccccEEEEEcccHHHHHHHHHHHHcccEEEEEEcccccccEEEEEEcccEEEEEcccEEEcHHHHHHHHHHHcccHHHcccccEEEEccccEEEEcccccEEEccccHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHcccccEEEccHHHHHHHHHHHHHHcccEEEEccEEEEEEEcccEEEEEEEccccEEEccEEEEEccHHHHHHcccHHHcccccccHHHHHHHcccccccccccccccEEEEEcccHHHHHHHHHHHHccccccccEEEEEEcccccccccccccccccEEEEEEEcccccccccccHHHHHHHHHHHHHHHHHHHHccccHHHEEEEEcccHHHHHHHcccccccccccccccccccccccccccccccEEEEcccccccccHHHHHHHHHHHHHHHHHHHccccccccccccccccccc //