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Nocardia farcinica IFM 10152 (nfar0)
Gene : crtO
DDBJ      :crtO         putative beta-carotene ketolase
Swiss-Prot:             

Homologs  Archaea  11/68 : Bacteria  119/915 : Eukaryota  65/199 : Viruses  0/175   --->[See Alignment]
c.3.1
:517 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   3->41 1reoA PDBj 3e-05 56.4 %
:RPS:PDB   3->487 3bi4A PDBj 3e-19 9.6 %
:RPS:SCOP  1->274 2ivdA1  c.3.1.2 * 1e-12 26.5 %
:HMM:SCOP  1->506 1o5wA1 c.3.1.2 * 8.3e-30 29.4 %
:HMM:PFM   13->275 PF01593 * Amino_oxidase 2.8e-11 20.9 244/449  
:HMM:PFM   224->500 PF01266 * DAO 2.4e-08 26.0 192/358  
:BLT:SWISS 4->487 PYRD2_BOVIN 2e-42 33.9 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56599.1 GT:GENE crtO GT:PRODUCT putative beta-carotene ketolase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(1906937..1908490) GB:FROM 1906937 GB:TO 1908490 GB:DIRECTION - GB:GENE crtO GB:PRODUCT putative beta-carotene ketolase GB:PROTEIN_ID BAD56599.1 LENGTH 517 SQ:AASEQ MTVVVVGSGHNALIAACYLARAGHPVHVLERDEVLGGAVSTVARFPGHRVDRGSSAHLMIRHTGIVEELELERFGLRYLDCDPWGFAPGAPPLVFHRDLDATCASIERACGAADADAYRRFVGVWGPRSARVMRAFGAPPRPPHLLRSFWGLDTGAGGSALSREFLQSGDALLDSWFRDERLKAALAWFGAQSGPPMSEPGTAPMVGFAALMHTLPPGRAVGGSGALTEALVARLRADGATVSTGEAVTALRRVGERWRVRTAAGRELDATAVIAGAHVLTTLDLLEAGGFDRAVLAEWRARIRVGPGIGMVVRVATDALPSYPGASAAESARGLQLLVTERAQLYRAHGAALAGELPPRPVVLAMSFSVLDPGIAPAGEHQLSLWAQWHPYRLADGSDWAGHAEREADRIIAEVEAVAPGFAGSVRRRFVQTPVDLERELGLRGGNVMHVEMALDQMMMWRPLPELSGQRVPGAPGLYLTGASTHPGGGVSGASGRSAARLVLADRRRSRIPFLRR GT:EXON 1|1-517:0| BL:SWS:NREP 1 BL:SWS:REP 4->487|PYRD2_BOVIN|2e-42|33.9|475/581| TM:NTM 1 TM:REGION 1->23| SEG 488->501|gggvsgasgrsaar| BL:PDB:NREP 1 BL:PDB:REP 3->41|1reoA|3e-05|56.4|39/484| RP:PDB:NREP 1 RP:PDB:REP 3->487|3bi4A|3e-19|9.6|450/497| HM:PFM:NREP 2 HM:PFM:REP 13->275|PF01593|2.8e-11|20.9|244/449|Amino_oxidase| HM:PFM:REP 224->500|PF01266|2.4e-08|26.0|192/358|DAO| RP:SCP:NREP 1 RP:SCP:REP 1->274|2ivdA1|1e-12|26.5|245/341|c.3.1.2| HM:SCP:REP 1->506|1o5wA1|8.3e-30|29.4|269/0|c.3.1.2|1/1|FAD/NAD(P)-binding domain| OP:NHOMO 281 OP:NHOMOORG 195 OP:PATTERN 11----1-11111111---------------------------------------------------- 132--1-1----1-13222-21--432222212333423322-211-111111-1-1---322--1-112-----------11-----------------------111---------------------------11112---11-122--1-1-----1---1-1113-------------222----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2111-------11111111111--------------2------42-1---------------1---1111--------------------------------------------------222-----------------------------2-1------1---------12--------------------1------------------1------1221-2-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------111-1------------------------------------------------------------------1- ------1-------1--------------------------------------1-----------------------------------------------------1-1212111-11-111111121191-1211--11-111-111-11-111121133-211-----11-1--------1-1121-12--2211- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 487 STR:RPRED 94.2 SQ:SECSTR cEEEEEcccHHHHHHHHHHHTTcccEEEEcccccccTTccEEEcGGGcEEEccccEEccTTTcHHHHHHHHHHHHHHHHHccccEEccccccEEEETTTEEcTTcTTTcHHHHHHHHHHHHHHHHTTccccccccHHHHHHHHHHHHGGHHHccccccccccHHHHHHHHHHHHGGccHHHHHHHHHHHGGGHHHHTccTTTccHcHHHHccccccccEEEccHHHHHHHHHTTccGGTTcEETTccEEEEEEETTEEEEEETTccEEEEEEEEEcccHHHHHGGGTTccEEEccccHHHHHHTTccEEEccEEEEEEEccccccccccEEEEcccccHHHHHHHcccHHHHHHHccccccccTTcccEEEEEHHHHTcccEEEEEEccTHHHHHHTTTTcHHHHHHHHHHHHHHHHHHTTccccEEcccccccEEEEEEEccTTTcTTTccEEEccTTccHHHHHHHHHHccHcccEEEccGGGcc############################## DISOP:02AL 511-517| PSIPRED cEEEEEcccHHHHHHHHHHHHccccEEEEEcccccccEEEEEEEcccEEEccccHHHHHHccHHHHHHccHHHcccEEEccccEEEccccccEEccccHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHccccEEcccHHHHHHHHHHHHHHcccEEEEcccEEEEEEcccEEEEEEcccEEEEccEEEEEccHHHHHHHccccccccHHHHHHHHHcccccccEEEEEEEcccccccccccccccccccccccccHHHHHHHHHHHHHcccccccEEEEEEcccccccccccccEEEEEEEEcccccccccccHHHHHHHHHHHHHHHHHHHcccccccEEEEEEccHHHHHHHccccccccccccccHHHHHccccccccccccccccccEEEEcccccccccHHHHHHHHHHHHHHHHHHccccccccc //