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Nocardia farcinica IFM 10152 (nfar0)
Gene : cysM
DDBJ      :cysM         putative cysteine synthase
Swiss-Prot:             

Homologs  Archaea  47/68 : Bacteria  803/915 : Eukaryota  181/199 : Viruses  0/175   --->[See Alignment]
c.79.1
:320 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   1->320 3dwgA PDBj e-128 75.0 %
:RPS:PDB   4->313 3bm5B PDBj 9e-54 31.2 %
:RPS:SCOP  4->311 1d6sA  c.79.1.1 * 2e-77 36.1 %
:HMM:SCOP  4->300 1wkvA1 c.79.1.1 * 3.8e-78 37.8 %
:RPS:PFM   11->276 PF00291 * PALP 9e-23 39.2 %
:HMM:PFM   11->290 PF00291 * PALP 8.8e-52 31.3 262/297  
:BLT:SWISS 1->320 CYSM_MYCTU e-127 75.0 %
:PROS 37->55|PS00901|CYS_SYNTHASE
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55936.1 GT:GENE cysM GT:PRODUCT putative cysteine synthase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 1207834..1208796 GB:FROM 1207834 GB:TO 1208796 GB:DIRECTION + GB:GENE cysM GB:PRODUCT putative cysteine synthase GB:PROTEIN_ID BAD55936.1 LENGTH 320 SQ:AASEQ MARYESLIATLGDTPLVGLRTLSPKWDGDDHVRLWAKLEDRNPTGSVKDRPALRMIEQAEAEGRLRPGCTILEPTSGNTGISLAMAAKLKGYQLVCVMPENTSVERRQLLTMYGARIIDSPAAGGSNQAVALAKQIAAENPDWVMLYQYGNPANAQAHYDTTGPELLADLPEITHFVAGLGTTGTLMGTGRFLREQVPGIEIVAAEPRYGELVYGLRNIDEGFIPELYDETVLTTRYSVGPYDAVKRTRELVGEEGIFAGISTGAILHAALGIGRKALQAGRRADIAFIVADGGWKYLSTGAYDGTLEDAESRLEGQLWA GT:EXON 1|1-320:0| BL:SWS:NREP 1 BL:SWS:REP 1->320|CYSM_MYCTU|e-127|75.0|320/323| PROS 37->55|PS00901|CYS_SYNTHASE|PDOC00700| SEG 179->190|glgttgtlmgtg| BL:PDB:NREP 1 BL:PDB:REP 1->320|3dwgA|e-128|75.0|320/325| RP:PDB:NREP 1 RP:PDB:REP 4->313|3bm5B|9e-54|31.2|308/335| RP:PFM:NREP 1 RP:PFM:REP 11->276|PF00291|9e-23|39.2|255/293|PALP| HM:PFM:NREP 1 HM:PFM:REP 11->290|PF00291|8.8e-52|31.3|262/297|PALP| GO:PFM:NREP 3 GO:PFM GO:0003824|"GO:catalytic activity"|PF00291|IPR001926| GO:PFM GO:0008152|"GO:metabolic process"|PF00291|IPR001926| GO:PFM GO:0030170|"GO:pyridoxal phosphate binding"|PF00291|IPR001926| RP:SCP:NREP 1 RP:SCP:REP 4->311|1d6sA|2e-77|36.1|299/323|c.79.1.1| HM:SCP:REP 4->300|1wkvA1|3.8e-78|37.8|286/0|c.79.1.1|1/1|Tryptophan synthase beta subunit-like PLP-dependent enzymes| OP:NHOMO 2455 OP:NHOMOORG 1031 OP:PATTERN 221122111111111121---1--2222133211--------132-11-111--11--1122111--1 5232321222222143344-43225243444434448246143223212221333122--533143663521111-11-2124111112221-1-----32423321133---------------2222232332222222111313224224222422222222225542222222222222211111111333333333333333433233333333331322111111552333333333333322222222-21122-2-112212-2--1122211111111111111111111111111111111111112221111243233333333332223312222121-12231213222131332211213133223-----222222223433313222222123122222333152-4222224222222233321122222122222222222222223-----------------------------1222221111122212222222111333343221235331211322333333232113112233111111112222332311221132111-232232342555549322111111111112111111121111112212221221124333223222212332211--22211--11133422332222222222-2222222222222222222444446532222222222222222522222222-44443443444411-31111111112243211111111111111122222221112254443345233322533211111111122212222221122332323322222221121333322------------------------------------1211111111122 ----234-421-2244344444435434421224443535445433334643853433343433333323223332212233333322-55433333333233444-4F23222421111111133-216C1-222-11-1111--11--21-2-121113424223222158343444o444655BFG3F53397665 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 320 STR:RPRED 100.0 SQ:SECSTR ccccccGGGGcccccEEEccGGGccTTccTTcEEEEEEGGGcTTccTHHHHHHHHHHHHHHHTcccTTcEEEEEcccHHHHHHHHHHHHHTccEEEEEETTccHHHHHHHTTTTccccEEcTTcccTTTHHHHHHHHHHcGGGEEEccTTTcHHHHHHHHHHHHHHHHHTTTEEEEEEEccccHHHHHHHHHHHTTcTTcEEEEEEEGGGcTTTTcTTcccccccTTccGGGccEEEEEcHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHTcGGGTTcEEEEEEEEcccGGGGTTccTccccccHHHHHHTTcccc PSIPRED ccccccHHHHHccccEEEcccccHHcccccccEEEEEEcccccccccHHHHHHHHHHHHHHccccccccEEEEccccHHHHHHHHHHHHHcccEEEEEcccccHHHHHHHHHcccEEEEEcccccHHHHHHHHHHHHHHccccEEEcccccHHHHHHHHHHHHHHHHHHcccccEEEEEccccHHHHHHHHHHHHHccccEEEEEccccccccccccccccccccccccHHHccEEEEEcHHHHHHHHHHHHHHcccEEccHHHHHHHHHHHHHHHHHHcccccEEEEEEcccccccccHHHcHHHHHHHHHHHcccccc //