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Nocardia farcinica IFM 10152 (nfar0)
Gene : dapA2
DDBJ      :dapA2        putative dihydrodipicolinate synthase
Swiss-Prot:             

Homologs  Archaea  54/68 : Bacteria  811/915 : Eukaryota  114/199 : Viruses  0/175   --->[See Alignment]
c.1.10
:306 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   7->266 3fluD PDBj 8e-34 33.5 %
:RPS:PDB   6->267 3cprA PDBj 7e-44 27.1 %
:RPS:SCOP  6->267 1f5zA  c.1.10.1 * 8e-50 22.1 %
:HMM:SCOP  2->297 1xkyA1 c.1.10.1 * 1.5e-67 42.8 %
:RPS:PFM   5->271 PF00701 * DHDPS 3e-32 39.4 %
:HMM:PFM   6->282 PF00701 * DHDPS 2e-65 35.5 273/289  
:BLT:SWISS 8->267 DAPA1_BACHD 3e-35 31.1 %
:PROS 138->168|PS00666|DHDPS_2
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57519.1 GT:GENE dapA2 GT:PRODUCT putative dihydrodipicolinate synthase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 2840096..2841016 GB:FROM 2840096 GB:TO 2841016 GB:DIRECTION + GB:GENE dapA2 GB:PRODUCT putative dihydrodipicolinate synthase GB:PROTEIN_ID BAD57519.1 LENGTH 306 SQ:AASEQ MSFRPSGIFVPLVTPFDEHGAVAAAELARLAHTVLDEGAAGLVALGTTAEPATLSAAERVRVLRVCGEVCRARGVPLIAAVGSNDTVATVRAIVQTVARTDVAAVLTVVPYYVRPSEAGVVAHFEYVAERSPVPVLVYNVPYRTAQTVGYEAMLELARKPGIVGVKQAVGAVDTDTARLIAHAPATFSVLAGEDTLVSPLLAMGACGGILATANVCAGELVELHRRWLDGTPDPARELADRLVEPARLLLSEPNPTVIKAVLHARGLLSTPRVRLPLLTAAPSPAVLAAVRALRAEYPGEVVTTGR GT:EXON 1|1-306:0| BL:SWS:NREP 1 BL:SWS:REP 8->267|DAPA1_BACHD|3e-35|31.1|257/295| PROS 138->168|PS00666|DHDPS_2|PDOC00569| SEG 21->31|avaaaelarla| SEG 38->49|gaaglvalgtta| SEG 274->295|rlplltaapspavlaavralra| BL:PDB:NREP 1 BL:PDB:REP 7->266|3fluD|8e-34|33.5|257/293| RP:PDB:NREP 1 RP:PDB:REP 6->267|3cprA|7e-44|27.1|255/301| RP:PFM:NREP 1 RP:PFM:REP 5->271|PF00701|3e-32|39.4|264/288|DHDPS| HM:PFM:NREP 1 HM:PFM:REP 6->282|PF00701|2e-65|35.5|273/289|DHDPS| GO:PFM:NREP 2 GO:PFM GO:0008152|"GO:metabolic process"|PF00701|IPR002220| GO:PFM GO:0016829|"GO:lyase activity"|PF00701|IPR002220| RP:SCP:NREP 1 RP:SCP:REP 6->267|1f5zA|8e-50|22.1|258/293|c.1.10.1| HM:SCP:REP 2->297|1xkyA1|1.5e-67|42.8|290/0|c.1.10.1|1/1|Aldolase| OP:NHOMO 1417 OP:NHOMOORG 979 OP:PATTERN ------1-1111111--1111111211122211111111111111111111111111-112-112--- 2251121122111111111-1111121111111222233211111421112-121112--11222132221111121121111111111211111111111111111211-------1------111111111111-----111-111111111111111111111111111111111111112--111112112222222222222223233212221332211111111231111111111111111111111--11-1-1-221112-11111111-------11111111111111-------------111111111112124111111121223111111111--11311111111112121121-1212111111111115231113422111111111112-112118111111422234243543411111132122111111111111111121211-11111111111111111111111111111111343224332323111133342222222241133113421121121212312112112111111111111111--11111211111211111111111111111111112211211111111111111111222111211-12111111211112111122--1111111111131321314223443422-22422322222532232221223211232323233333232232222222211111111111111111111111111111312222212211111221111111112111222212121222111111----1---111111111112111112121122211111111111111----------1-------------------------1111111111111 ---------------2111212211-1-11111-1-111111-1----2255864431------1-------4-1--------------12111-----1---1----1-21-1113-1-111-1112-231-111111-1-111-1---1--1111122211311---1---111111J1111122131311241112 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 273 STR:RPRED 89.2 SQ:SECSTR cTTTcccEEEEccccccTTccccHHHHHHHHHHHHHTTccEEEEccTTTTTTTccHHHHHHHHHHHHHHHTTTccEEEEEcccccHHHHHHHHHHHHHHTTccEEEEEccccccccHHHHHHHHHHHHHHccccEEEEEcHHHHcccccHHHHHHHTTcTTEEEEEcccccHcccHHHHHHHHHHHcEEEEccGGGHHHHHHTTccEEEEcGGGTcHHHHHHHHHHHHHTcHHHHHHHHHHTHHHHHHHHHHcHHHHHHHHHHHTTcGGGGcc################################# DISOP:02AL 1-2| PSIPRED ccccccEEEEEccccccccccccHHHHHHHHHHHHHccccEEEEcccccccccccHHHHHHHHHHHHHHHcccccEEEEEcccccHHHHHHHHHHHHHHccccEEEEEccccccccHHHHHHHHHHHHHHccccEEEEEccccccccccHHHHHHHHccccEEEEEEccccHHHHHHHHHHHccccEEEEEccHHHHHHHHHccccEEEEEcHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcc //