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Nocardia farcinica IFM 10152 (nfar0)
Gene : dnaA
DDBJ      :dnaA         putative replication initiator protein
Swiss-Prot:DNAA_NOCFA   RecName: Full=Chromosomal replication initiator protein dnaA;

Homologs  Archaea  0/68 : Bacteria  903/915 : Eukaryota  2/199 : Viruses  0/175   --->[See Alignment]
a.4.12c.37.1
:662 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   328->559 2z4rA PDBj 4e-55 42.0 %
:BLT:PDB   572->653 1j1vA PDBj 3e-10 40.0 %
:RPS:PDB   10->92 2e0gA PDBj 6e-05 13.3 %
:RPS:PDB   327->537 3bq9A PDBj 2e-29 13.1 %
:RPS:SCOP  327->532 1l8qA2  c.37.1.20 * 4e-36 38.1 %
:RPS:SCOP  567->658 1j1vA  a.4.12.2 * 3e-25 34.8 %
:HMM:SCOP  322->538 1l8qA2 c.37.1.20 * 8.1e-46 27.7 %
:HMM:SCOP  554->659 1l8qA1 a.4.12.2 * 2.4e-32 45.3 %
:RPS:PFM   327->540 PF00308 * Bac_DnaA 6e-72 57.0 %
:RPS:PFM   572->636 PF08299 * Bac_DnaA_C 3e-17 58.5 %
:HMM:PFM   324->541 PF00308 * Bac_DnaA 4.7e-100 57.3 218/219  
:HMM:PFM   569->636 PF08299 * Bac_DnaA_C 1.4e-30 52.9 68/70  
:BLT:SWISS 1->662 DNAA_NOCFA 0.0 100.0 %
:PROS 618->636|PS01008|DNAA
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD54843.1 GT:GENE dnaA GT:PRODUCT putative replication initiator protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 1..1989 GB:FROM 1 GB:TO 1989 GB:DIRECTION + GB:GENE dnaA GB:PRODUCT putative replication initiator protein GB:PROTEIN_ID BAD54843.1 LENGTH 662 SQ:AASEQ MDDEQNVLATVWPEVIAELTTGSADGSIPAVTRAQQAWLKLVKPITVAQGFALLSVPSSLAQEAIERDLREPILRSLGRRLGPQVEGLGVRIAAPATPTAERAAANPRHARMTSRPERPRGERPVPGLPGQEAVDRPETLPRYSQAAESVPGYPARQDHSRPGDYPPAAEYTPAAEYTPAAEYTPAAEYSPEPEYTPATDYPGADDYPTTVFRLPPGGFAEPPGDGRPGGVPEISTPRRDGHGPRRDATPPGQEALFTPEPGDRPLRDTDRPLREPAAGHDVRESDGPVERDDEPVVNIRDSWPTYFAKNQESTPAPANSSASLNAKYTFETFVIGASNRFAHAAAVAIAEAPARAYNPLFVWGASGLGKTHLLHAAGHYAQRLFPGMRVKYVSTEEFTNDFINSLRDDRKVAFKRRYRETDILLVDDIQFIEGKEGIQEEFFHTFNTLHNANKQIVVSSDRPPKQLATLEERLRTRFEWGLITDVQPPELETRIAILRKKARMDRLDVPHDVLELIASRVERNIRELEGALIRVTAFASLNGQPLDLSLAEVVLRDLMPDTATLEINAATIMAVTAEYFNTTLEELTGPGKARPLAQARQIAMYLCRELTDLSLPKIGQAFGRDHTTVMYAEKKVRKEMTERRRVYDQVQELTARIKQRSR GT:EXON 1|1-662:0| SW:ID DNAA_NOCFA SW:DE RecName: Full=Chromosomal replication initiator protein dnaA; SW:GN Name=dnaA; OrderedLocusNames=NFA_10; SW:KW ATP-binding; Complete proteome; Cytoplasm; DNA replication;DNA-binding; Nucleotide-binding. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->662|DNAA_NOCFA|0.0|100.0|662/662| GO:SWS:NREP 5 GO:SWS GO:0005524|"GO:ATP binding"|ATP-binding| GO:SWS GO:0005737|"GO:cytoplasm"|Cytoplasm| GO:SWS GO:0006260|"GO:DNA replication"|DNA replication| GO:SWS GO:0003677|"GO:DNA binding"|DNA-binding| GO:SWS GO:0000166|"GO:nucleotide binding"|Nucleotide-binding| PROS 618->636|PS01008|DNAA|PDOC00771| SEG 93->105|aapatptaeraaa| SEG 115->130|rperprgerpvpglpg| SEG 165->199|yppaaeytpaaeytpaaeytpaaeyspepeytpat| SEG 261->276|pgdrplrdtdrplrep| SEG 313->326|stpapanssaslna| SEG 342->356|ahaaavaiaeapara| BL:PDB:NREP 2 BL:PDB:REP 328->559|2z4rA|4e-55|42.0|231/240| BL:PDB:REP 572->653|1j1vA|3e-10|40.0|80/92| RP:PDB:NREP 2 RP:PDB:REP 10->92|2e0gA|6e-05|13.3|75/107| RP:PDB:REP 327->537|3bq9A|2e-29|13.1|199/446| RP:PFM:NREP 2 RP:PFM:REP 327->540|PF00308|6e-72|57.0|214/218|Bac_DnaA| RP:PFM:REP 572->636|PF08299|3e-17|58.5|65/70|Bac_DnaA_C| HM:PFM:NREP 2 HM:PFM:REP 324->541|PF00308|4.7e-100|57.3|218/219|Bac_DnaA| HM:PFM:REP 569->636|PF08299|1.4e-30|52.9|68/70|Bac_DnaA_C| GO:PFM:NREP 4 GO:PFM GO:0005524|"GO:ATP binding"|PF08299|IPR013159| GO:PFM GO:0006270|"GO:DNA-dependent DNA replication initiation"|PF08299|IPR013159| GO:PFM GO:0006275|"GO:regulation of DNA replication"|PF08299|IPR013159| GO:PFM GO:0043565|"GO:sequence-specific DNA binding"|PF08299|IPR013159| RP:SCP:NREP 2 RP:SCP:REP 327->532|1l8qA2|4e-36|38.1|202/213|c.37.1.20| RP:SCP:REP 567->658|1j1vA|3e-25|34.8|92/94|a.4.12.2| HM:SCP:REP 322->538|1l8qA2|8.1e-46|27.7|213/213|c.37.1.20|1/1|P-loop containing nucleoside triphosphate hydrolases| HM:SCP:REP 554->659|1l8qA1|2.4e-32|45.3|106/0|a.4.12.2|1/1|TrpR-like| OP:NHOMO 1079 OP:NHOMOORG 905 OP:PATTERN -------------------------------------------------------------------- 1111111111111111112111111111111111111111111111111111111111111111111111111111111111111111111111111--11111111122222222222222222111111111111111111111111111111111111111111111111111111111111111112111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111221111111111111-1212111111111111111111111111111111111-1111111111111111111111111211111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111122121111111111111111121111122111111111111111111222222222222212221111111111111111111111111111111111111111111121122222222211121122222--1221111111122222222221222222-2212222222222222222222222222222222222222222222222221-222222222222--2211111222231221222222111112112111111111122111122221222212221111111111111111111111111111111111111111111111111111111111111111-111111111111111-1111111111111111 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------2-----------------1---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 402 STR:RPRED 60.7 SQ:SECSTR #########cHHHHHHHHHHHHccc#######cHHHHTTTTcEE#EEcccEEEEEEccHHHHHHHHHTHHHHHHHHHHHHTcccccEEccEE##########################################################################################################################################################################################################################################EEEEccccHHHHHHHHHHHHHHTcGGGTTcTccccEEEEEcGGGHHHHHHHHHHHHHHTcTTGGGcEEEEccHHHHHHHHHHHHHHHHHHHHHTHHHHHHTccccccccccccGGGTccccccHHHHHTccccTTccHHHHGEEHHHHHHHHHHHHHHHHcHHHHHHHHHHccEEEEccHHHHHHHHHHHHHHHHHTTccccTTccccccEHHHHHccTTcHHHHHHHHHHHHHHHHHHHTcccccHHHHHHTccHHHHHHHHHHTTccGGGTccHHHHHHHHHHHTHHHHHHHHHccccGGGHHHHHHHHHHHHHHHHTcccHHHH######### DISOP:02AL 1-5, 63-281, 291-319, 587-589, 639-640, 659-662| PSIPRED cccccccHHHHHHHHHHHHHccccccccccccccccccEEEccccccccccccccccccccccHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccEEccccHHHHHHHHHHHHHcccccccEEEEEccccccHHHHHHHHHHHHHHHcccccEEEEcHHHHHHHHHHHHHcccHHHHHHHHHcccEEEEEcHHHHcccHHHHHHHHHHHHHHHHcccEEEEEccccHHHHHHHHHHHHHHHHcccEEEEccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHcccccEEEcHHHHHHHHHHHHcccHHHHHccccccccccHHHHHHHHHHHHHcccHHHHHHHHcccHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHcc //